| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1762 |
|---|
| Symbol | |
|---|
| ID | 3581168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 2057403 |
|---|
| End bp | 2058986 |
|---|
| Gene Length | 1584 bp |
|---|
| Protein Length | 527 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637685456 |
|---|
| Product | apolipoprotein N-acyltransferase |
|---|
| Protein accession | YP_289820 |
|---|
| Protein GI | 72162163 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0815] Apolipoprotein N-acyltransferase |
|---|
| TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCCTGC TTCTTCGCGC ACTGGCTGCT GCACTGTCCG GGCTGGCCCA GCTGGCCGCC
CTAGAACCGT ACGGCCTGTG GCCTCTCGCG GTTCTCAGCC CGGCACTGCT GCTAGCCGCG
GTCTACGGGG TGGACCTCCG GCGGGCTGCC TGGCTGGGCG CGCTGTCCGG GGCCTCCCTC
ATGGTCCCGC TCGTCCACTG GCAGAAAGTC TTCGGCATCG ACGTCTGGCT GGTCATCGCC
GCCGCGGAAA CCGTCTACTT CATCCCCATG GCGATGGGGA TCGCCTTGGT GGCGCGGCTG
CCCGGCTGGC CGCTGTGGAC CGCGGCACTG TGGGTGGTCC AGGAGTTCGT CCGCGCACGC
TTCCCGCTCG GCGGCTTCCC CTGGGGCAAG CTGGCGTTCA GCCAGCCAGA CAGCCCGTTC
GCGGGCTATG CCGCCCTCGG CTCCTCCGCA CTGGTCACCT TCATGGTCGC GCTGACCGGT
GCGGCACTCG TCGCGGCAGC CCGCGCCTTG AAAGGGGTCT ACTGCCAACC GGGAGCACGC
CAACCGCTGC TCGCCCTCAC CGGCGGACTC ACCGCGATCG TGCTCCTCCC TCTGGGAGGC
ACCCTGGCCC TGCACGCCAC CGCTCTGGAC GAGGAGCGCA CCGTGACCGT CGCCCTCGTC
CAAGGCAACG TGCCCAACGT GGGCGAGATG AACATCCTCG GCGAACGGAT GCAGGTGCTG
CGCAACCACG TGGACGGCGT GCATGAACTG GCACGGCTGG TCCGCGAAGG CGAAGTGCCC
CAGCCCGAGA TGGTCATCCT CCCGGAAAAC GCCAGCGACA TCGACGCCTA CGCCGACCCG
TACGCCGCCT CCCTCATCTC CGAGGCCGCC GCGGACATCG GGGCGCCGCT GCTGTTCGGC
ATCACCCGCT ACAGCCCCGA CGGCACCGAA CGCGAGATCC GCAGCGTGGT GTGGCACCCG
CACACCGGAC CCGGCGACCA CTACACCAAG CGCTACCTGG TGCCTTTCGG GGAGTATGTG
CCCTTCCGCG ACGTGTTCGC CACCGTCATC TCCCGCCTGG AACAGGTGAG CAGCGACGCC
GTCCCCGGCA CCGAGCCGGG GGCGGTGGAA CTGAACGGCA CCACGGTCGC GGTAGCCATC
TGCTTCGATA TCGCTTTCGA CCGCCCAGTG CGCGAAGCCG TCGCGGAAGG CGGGCAGATC
ATCGTGGAGC CCACCAACAA CGCGAACTAC AACTTCACCG GGCAGTCCGA CCAGCAGCTG
GCCATCACCC GGCTGCGTGC GGTCGAGCAC GGCAGGCCCG CTGTCATCGC CGCCACGAGC
GGGATCAGCG CCGTGGTCGA CGCCCGCGGA CAGGTGCTCT ACCGCTCACC CGAAGCGGAA
CCCGCCGTCC ACGTCGCGGA GATTCCCGCG ATGCGCGGAC TGACCCCGGC AACCCGGCTC
GGCGCGCTTC CCGAGCTTGC GCTGACCCTC GCCGGGCTGG GCGCGGTCGT CGCTGCCCTC
GTCCGTGCCC GCCGCACAGC GGGGAGTGCG CTGCGGACCG GGCAGCTGGA CCAGCAGAAG
ACCGAACCGT CCCCCACCGG CTGA
|
|---|
| Protein sequence | MTLLLRALAA ALSGLAQLAA LEPYGLWPLA VLSPALLLAA VYGVDLRRAA WLGALSGASL
MVPLVHWQKV FGIDVWLVIA AAETVYFIPM AMGIALVARL PGWPLWTAAL WVVQEFVRAR
FPLGGFPWGK LAFSQPDSPF AGYAALGSSA LVTFMVALTG AALVAAARAL KGVYCQPGAR
QPLLALTGGL TAIVLLPLGG TLALHATALD EERTVTVALV QGNVPNVGEM NILGERMQVL
RNHVDGVHEL ARLVREGEVP QPEMVILPEN ASDIDAYADP YAASLISEAA ADIGAPLLFG
ITRYSPDGTE REIRSVVWHP HTGPGDHYTK RYLVPFGEYV PFRDVFATVI SRLEQVSSDA
VPGTEPGAVE LNGTTVAVAI CFDIAFDRPV REAVAEGGQI IVEPTNNANY NFTGQSDQQL
AITRLRAVEH GRPAVIAATS GISAVVDARG QVLYRSPEAE PAVHVAEIPA MRGLTPATRL
GALPELALTL AGLGAVVAAL VRARRTAGSA LRTGQLDQQK TEPSPTG
|
|---|
| |