Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1758 |
Symbol | |
ID | 3581164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 2053063 |
End bp | 2054445 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637685452 |
Product | putative transporter |
Protein accession | YP_289816 |
Protein GI | 72162159 |
COG category | [R] General function prediction only |
COG ID | [COG2270] Permeases of the major facilitator superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCTACTT CCCTCCCGGC GTCCGCGCCC ACCCCTTCCA GTTCCGACGC TGAAGCCAGG CTGCTCCGTA AAGAACGGCG GGCCTGGTAC ATGTACGACT GGGCGCAGTC GGTGTTCAAC ACCACTGTGA TCACGGTCTT CCTCGGCCCT TACCTGACTG CGCTCGCCTC CGGGGCTGCC GGTCCTGACG GCAAGATCAG CGTGTTCGGC TGGATGATCA CGCCCGCTTC CCTCTACCCC TATGCCACGT CCCTGTCCGT GCTGATCCAA CTGGTGCTGC TGCCCGTGCT CGGCGCGGTG GTCGACACCA GCGGACGCAA ACGGGAACTG CTGGGTGTGA CCGCCTACCT CGGTGCGTTC GCCACCATGG GCCTGTACTT CGCGGCGGAC GACCGCTACC TGCTCGGTGC AGCCCTGTTC GTCGTGGCCA ATGTCGCGTT CGGGGCTTCT ATCGTGGTCG CCAACTCGTT CCTGCCCGAC ATTGCCTCGG AAGAGGAGCG CGACACTGTC TCCTCCCGAG GCTGGGCGAT GGGCTACCTG GGCGGGGCCC TGCTGCTCAC CCTGAACCTG GCCCTCTTCC TCAGCCATGA GAGCTTCGGC TTGGAAGAAG GCCACGCGGT GCGGATCTGC ATGATGTCGG CGGGCGTATG GTGGGCGATC TTCACCATCA TTCCGGTGGC ACGGCTCCGC AACCGGCGCG CCGGGTCGCT GGAGGTCCCG GCACAGCGGA TCGCTGTGGG CCGCAGCTTC GCGCAACTGT GGCACACCAT CACCAGTCTG CGCGCCTACC CCCGCACCCT GCTGTTCCTG GTCGCCTACA TCATGTTCAA CGACGGGATC CAGACCGTCA TCGCCTTCTC GGCGACCTTC GCCGACCAGG CGTTGAAACT GGACCAGAGC GTGCAGATCG GCACCATTCT CATGGTGCAG TTCGTCGCAT TCGGCGGAGC GCTGCTGCTC GGCGCGATCG CCCGACGGGT CGGCACGAAG AAGACCATCC TGGGCAGCCT CGTGGTGTGG ACCGCGGTGG TCGCGGTGGC TCCCCTGCTG CAGGAAGGCG CGGCCGTGCA GTTCTTCGCG CTGGGCTTCT TCATTGCGAT CGTGCTGGGC GGCACCCAGG CGCTGTCGCG GTCCCTGTTC TCCCTGCTCA TTCCCAAGGG CAAGGAGGCG GAGTACTTCG GCCTCTATGA GATCAGCGAC AAAGGCTCGG CGTTCCTGGG GGCGCTCGTG CTCGGTGTGG TGTTGGACAC CACGGGAGGC GACTACCGGC TGGCGATCCT GTCGCTCATC GTGTTCTTCG CGCTCGGTTT CGTGCTGCTG CTGGCCGTCA ACCTTCCCCA GGCGATCCGT GCCGTGGGGA ACCGGGTCCC CGAAAAACTC TGA
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Protein sequence | MSTSLPASAP TPSSSDAEAR LLRKERRAWY MYDWAQSVFN TTVITVFLGP YLTALASGAA GPDGKISVFG WMITPASLYP YATSLSVLIQ LVLLPVLGAV VDTSGRKREL LGVTAYLGAF ATMGLYFAAD DRYLLGAALF VVANVAFGAS IVVANSFLPD IASEEERDTV SSRGWAMGYL GGALLLTLNL ALFLSHESFG LEEGHAVRIC MMSAGVWWAI FTIIPVARLR NRRAGSLEVP AQRIAVGRSF AQLWHTITSL RAYPRTLLFL VAYIMFNDGI QTVIAFSATF ADQALKLDQS VQIGTILMVQ FVAFGGALLL GAIARRVGTK KTILGSLVVW TAVVAVAPLL QEGAAVQFFA LGFFIAIVLG GTQALSRSLF SLLIPKGKEA EYFGLYEISD KGSAFLGALV LGVVLDTTGG DYRLAILSLI VFFALGFVLL LAVNLPQAIR AVGNRVPEKL
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