| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1757 |
|---|
| Symbol | |
|---|
| ID | 3581163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 2052209 |
|---|
| End bp | 2053000 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637685451 |
|---|
| Product | putative glycerophosphoryl diester phosphodiesterase |
|---|
| Protein accession | YP_289815 |
|---|
| Protein GI | 72162158 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTACCTCG CCAGTCCCGT CCCCATCGGC CTCGCCCACC GGGGCGGCTG GCTTATTGAT
CAGCGCGGGC AGGTCCGTAC CGATCTGGAG AACACCGCGG CCGCGTTCGA ACACGCGGTG
CGCTTGGGAT ACCGCTATCT GGAAACCGAT GTGCGGGCGA CTGCTGACGG GGTCCTCGTG
GCTTTCCACG ACCCCGTGCT GGACCGGGTC ACGGATCGTT CCGGCGCGAT CGCCACACTG
CCCTACGCTG AAGTAGCCCG GGCGCGGGTC GGCGGCAGCG AACCGATCCC GCTGCTGGAA
GACCTGCTGG GCTCACTGCC TGATGCCCGG TTCAACATCG ACGTCAAAGC CGACTCGGCC
GTCGAACCGC TGCGCCAGGC CCTGCGCCGC ACCAACGCCT GGCACCGGGT GTGCGTGGGC
TCCTTCAGCC AGGCGCGGCT CGAACGGGTG CGCCGCACCT TCGACCGGCG GGTAGCCCTG
TCCAGCGGTC CGGTGGACGT GCTGCGGCTG CGGGCCGCCT CCCTCCTGCC GCTGCTGCTG
CCGCTGGCCC GCCGCGACGT TTCCTGCGTG CAGATCCCCG TGCACTACCA GGGGTTTCCT
CTGGTCACCC GGGACCTGGT CGCAGCCGCA CACCGTCTCG GCATCCACGT CCACGTGTGG
ACCATCAACG ATCCTTTTCT GATGGAACGC CTCCTGGACG CGGGAGTGGA TGGCATTATC
ACTGACAACG TCACCGCCCT GCGGCGCATC CTCGTCGACC GCGGGCTGTG GCCCGCGACA
TCCACTTCCT GA
|
|---|
| Protein sequence | MYLASPVPIG LAHRGGWLID QRGQVRTDLE NTAAAFEHAV RLGYRYLETD VRATADGVLV
AFHDPVLDRV TDRSGAIATL PYAEVARARV GGSEPIPLLE DLLGSLPDAR FNIDVKADSA
VEPLRQALRR TNAWHRVCVG SFSQARLERV RRTFDRRVAL SSGPVDVLRL RAASLLPLLL
PLARRDVSCV QIPVHYQGFP LVTRDLVAAA HRLGIHVHVW TINDPFLMER LLDAGVDGII
TDNVTALRRI LVDRGLWPAT STS
|
|---|
| |