Gene Tfu_1753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1753 
Symbol 
ID3580992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2045167 
End bp2047377 
Gene Length2211 bp 
Protein Length736 aa 
Translation table11 
GC content65% 
IMG OID637685447 
Producthelicase RecD/TraA 
Protein accessionYP_289811 
Protein GI72162154 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID[TIGR01448] helicase, putative, RecD/TraA family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.473009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTCCG GTGAACCCTT CCGCCCGGCG GTGCTGGAAG GAGTGCTGGA ACGCATCACA 
TACGTCAACG AGGAGACCGG CTACACCGTG GCCCGCGTCG ACACGGGACG CGGCAGTGAC
CTGGTCACCG TCGTCGGCGC CCTGCTCGGC GCCCATCCCG GCGAATCGCT GCGCATGGAA
GGCCGGTGGA CCTCCCACCC CCAGTACGGG CGGCAGTTCC AGGTGGAGAA CTACACCACG
GTCCTGCCCG CCACCGTCCA GGGGATCCGC CGCTATCTGG GGTCCGGGCT CGTCAAAGGG
ATAGGCCCCC GCTTGGCAGA ACACATCGTC AACCATTTCG GGGCGGCAGC GCTCGACGTT
ATCGAAAACT CCCCGGAGCG GCTCCTGGAA GTGCCGAAAC TCGGCCCGAA ACGCACGAAA
ATCATCACCG AGGCCTGGGA GGAGCAGAAA GCCATCAAAG AGGTGATGGT CTTCCTGCAA
ACCGTGAAAG TGTCCACCTC CCTGGCCGTG CGTATTTACA AGCAGTACGG CGACGACGCT
ATTCGCGTGG TGCGGGAGGA GCCTTACTCG CTCGCCGCGG ATGTGTGGGG GATCGGGTTC
AAAACCGCGG ACTCAATCGC CCAAGCCGTC GGTATTCCCC ACGACAGTCC GCAGCGGGTC
AAAGCCGGAA TCCAGTTCAC CCTTTCCGAG TTCACCAACG ACGGGCACTG CTATCTGCCT
GAGGACACTT TGATCAACGA GGCCGTGAAA ATCCTCCAGG TGGATTCGGC GCTCGTCATC
GACTGTCTGG CGGAGCTGGT CGCTGAGGAG AGAGTGGTCC GCGAAAAAGT CCCTGACCGG
GACGGCGAAT CAGTGACCGC TATCTACCTG CTCCCCTTCT ACCGTGCGGA GACCGCCCTC
GCCAACCAGG TGCGCGCGCT GCTGCACACC GAACACGACC GGCTGGCGTC TTTCGCCACC
GTGGACTGGG ACCGGGCCTT GGCGTGGCTG CGGAGCCAGA CCGGCGCCGA GCTGGCCCCC
GCCCAGGAAA AAGCCGTCAA ACTCGCGCTG ACCAACAAGG TCGCCGTACT CACCGGCGGG
CCGGGGTGCG GCAAGTCCTT TACCGTGGCC TCCATCATCA AACTGGCCGC AGCCAAACGC
GCCAAGATCA TGCTGGCCGC GCCTACGGGA CGCGCCGCAA AACGGCTCAC TGAACTGACC
GGGTATGACG CGTCGACCGT GCACCGGCTG CTGGAGCTCA AACCCGGCGG CGAGGCCGCG
TACGACCGCG ACAACCCGCT TGACTGCGAC CTGCTCGTCG TCGACGAAGC GTCCATGCTT
GACCTGCTGC TCGCCAACAA GCTGGTCAAA GCGGTGCCGC CCGGCGCCCA CCTGCTCCTT
GTCGGCGACG TCGACCAGCT TCCCTCAGTC GGTGCAGGCC AAGTGCTCCG CGACCTGCTC
GCCGACGGTT CACCGGTGCC CAGTGTCCGC CTCACCCACG TGTTCCGACA GGCCGCCCAG
TCCGGGGTGG TCACCAACGC GCACCGCATC AACACCGGCA AGCCCCTCCT GTTGGAGGGC
ATGACGGACT TCTACCTCTT CCCCTGCGAG GACACCGAAG CGGCCGCGGA ACTGACCGTG
GACGTGGTCG CCCGCCGTAT CCCCCGCCGG TTCGGGCTGG ACCCGCGCCG CGACATCCAA
GTACTCACCC CGATGCACCG GGGCCCCGCC GGGGCCGGGA ACTTGAACAT GCTGCTCCAA
GAAGCACTCA CCCCGGCCCG TCCAGGCGTG GCGGAACGGC GGGTTGGCAG CCGGGTCTTC
CGGGTCGGCG ACAAGGTCGT GCAGATCCGC AACAATTACG ACAAGGGCGC CAACGGCGTG
TTCAACGGCA CCCTCGGCAC GGTGACCGCG ATCGACCTGG ACGACCAGAC GCTGACCGTC
CTCACCGACG AAAACGAAGA GGTCGGCTAC GAGTTCACGG AGCTTGACGA GCTCACCCAC
GCTTATGCGT TGACCGTGCA CCGCTCCCAG GGCAGTGAAT ACCCGTGCGT GGTGGTGCCA
GTGACGACAA GTGCGTGGAT GATGCTGCAA CGCAACCTGC TGTACACCGC GGTGACACGC
GCGAAGAAAC TCGTGGTTTT GGTCGGGTCG CGGCGTGCTA TCGCCCAGGC GATCCGGAAC
GCGTCCTCGG GGCGCCGCCA TACCGCATTG GACTACCGGC TGCAGCGGTG A
 
Protein sequence
MASGEPFRPA VLEGVLERIT YVNEETGYTV ARVDTGRGSD LVTVVGALLG AHPGESLRME 
GRWTSHPQYG RQFQVENYTT VLPATVQGIR RYLGSGLVKG IGPRLAEHIV NHFGAAALDV
IENSPERLLE VPKLGPKRTK IITEAWEEQK AIKEVMVFLQ TVKVSTSLAV RIYKQYGDDA
IRVVREEPYS LAADVWGIGF KTADSIAQAV GIPHDSPQRV KAGIQFTLSE FTNDGHCYLP
EDTLINEAVK ILQVDSALVI DCLAELVAEE RVVREKVPDR DGESVTAIYL LPFYRAETAL
ANQVRALLHT EHDRLASFAT VDWDRALAWL RSQTGAELAP AQEKAVKLAL TNKVAVLTGG
PGCGKSFTVA SIIKLAAAKR AKIMLAAPTG RAAKRLTELT GYDASTVHRL LELKPGGEAA
YDRDNPLDCD LLVVDEASML DLLLANKLVK AVPPGAHLLL VGDVDQLPSV GAGQVLRDLL
ADGSPVPSVR LTHVFRQAAQ SGVVTNAHRI NTGKPLLLEG MTDFYLFPCE DTEAAAELTV
DVVARRIPRR FGLDPRRDIQ VLTPMHRGPA GAGNLNMLLQ EALTPARPGV AERRVGSRVF
RVGDKVVQIR NNYDKGANGV FNGTLGTVTA IDLDDQTLTV LTDENEEVGY EFTELDELTH
AYALTVHRSQ GSEYPCVVVP VTTSAWMMLQ RNLLYTAVTR AKKLVVLVGS RRAIAQAIRN
ASSGRRHTAL DYRLQR