Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1753 |
Symbol | |
ID | 3580992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 2045167 |
End bp | 2047377 |
Gene Length | 2211 bp |
Protein Length | 736 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637685447 |
Product | helicase RecD/TraA |
Protein accession | YP_289811 |
Protein GI | 72162154 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.473009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTCCG GTGAACCCTT CCGCCCGGCG GTGCTGGAAG GAGTGCTGGA ACGCATCACA TACGTCAACG AGGAGACCGG CTACACCGTG GCCCGCGTCG ACACGGGACG CGGCAGTGAC CTGGTCACCG TCGTCGGCGC CCTGCTCGGC GCCCATCCCG GCGAATCGCT GCGCATGGAA GGCCGGTGGA CCTCCCACCC CCAGTACGGG CGGCAGTTCC AGGTGGAGAA CTACACCACG GTCCTGCCCG CCACCGTCCA GGGGATCCGC CGCTATCTGG GGTCCGGGCT CGTCAAAGGG ATAGGCCCCC GCTTGGCAGA ACACATCGTC AACCATTTCG GGGCGGCAGC GCTCGACGTT ATCGAAAACT CCCCGGAGCG GCTCCTGGAA GTGCCGAAAC TCGGCCCGAA ACGCACGAAA ATCATCACCG AGGCCTGGGA GGAGCAGAAA GCCATCAAAG AGGTGATGGT CTTCCTGCAA ACCGTGAAAG TGTCCACCTC CCTGGCCGTG CGTATTTACA AGCAGTACGG CGACGACGCT ATTCGCGTGG TGCGGGAGGA GCCTTACTCG CTCGCCGCGG ATGTGTGGGG GATCGGGTTC AAAACCGCGG ACTCAATCGC CCAAGCCGTC GGTATTCCCC ACGACAGTCC GCAGCGGGTC AAAGCCGGAA TCCAGTTCAC CCTTTCCGAG TTCACCAACG ACGGGCACTG CTATCTGCCT GAGGACACTT TGATCAACGA GGCCGTGAAA ATCCTCCAGG TGGATTCGGC GCTCGTCATC GACTGTCTGG CGGAGCTGGT CGCTGAGGAG AGAGTGGTCC GCGAAAAAGT CCCTGACCGG GACGGCGAAT CAGTGACCGC TATCTACCTG CTCCCCTTCT ACCGTGCGGA GACCGCCCTC GCCAACCAGG TGCGCGCGCT GCTGCACACC GAACACGACC GGCTGGCGTC TTTCGCCACC GTGGACTGGG ACCGGGCCTT GGCGTGGCTG CGGAGCCAGA CCGGCGCCGA GCTGGCCCCC GCCCAGGAAA AAGCCGTCAA ACTCGCGCTG ACCAACAAGG TCGCCGTACT CACCGGCGGG CCGGGGTGCG GCAAGTCCTT TACCGTGGCC TCCATCATCA AACTGGCCGC AGCCAAACGC GCCAAGATCA TGCTGGCCGC GCCTACGGGA CGCGCCGCAA AACGGCTCAC TGAACTGACC GGGTATGACG CGTCGACCGT GCACCGGCTG CTGGAGCTCA AACCCGGCGG CGAGGCCGCG TACGACCGCG ACAACCCGCT TGACTGCGAC CTGCTCGTCG TCGACGAAGC GTCCATGCTT GACCTGCTGC TCGCCAACAA GCTGGTCAAA GCGGTGCCGC CCGGCGCCCA CCTGCTCCTT GTCGGCGACG TCGACCAGCT TCCCTCAGTC GGTGCAGGCC AAGTGCTCCG CGACCTGCTC GCCGACGGTT CACCGGTGCC CAGTGTCCGC CTCACCCACG TGTTCCGACA GGCCGCCCAG TCCGGGGTGG TCACCAACGC GCACCGCATC AACACCGGCA AGCCCCTCCT GTTGGAGGGC ATGACGGACT TCTACCTCTT CCCCTGCGAG GACACCGAAG CGGCCGCGGA ACTGACCGTG GACGTGGTCG CCCGCCGTAT CCCCCGCCGG TTCGGGCTGG ACCCGCGCCG CGACATCCAA GTACTCACCC CGATGCACCG GGGCCCCGCC GGGGCCGGGA ACTTGAACAT GCTGCTCCAA GAAGCACTCA CCCCGGCCCG TCCAGGCGTG GCGGAACGGC GGGTTGGCAG CCGGGTCTTC CGGGTCGGCG ACAAGGTCGT GCAGATCCGC AACAATTACG ACAAGGGCGC CAACGGCGTG TTCAACGGCA CCCTCGGCAC GGTGACCGCG ATCGACCTGG ACGACCAGAC GCTGACCGTC CTCACCGACG AAAACGAAGA GGTCGGCTAC GAGTTCACGG AGCTTGACGA GCTCACCCAC GCTTATGCGT TGACCGTGCA CCGCTCCCAG GGCAGTGAAT ACCCGTGCGT GGTGGTGCCA GTGACGACAA GTGCGTGGAT GATGCTGCAA CGCAACCTGC TGTACACCGC GGTGACACGC GCGAAGAAAC TCGTGGTTTT GGTCGGGTCG CGGCGTGCTA TCGCCCAGGC GATCCGGAAC GCGTCCTCGG GGCGCCGCCA TACCGCATTG GACTACCGGC TGCAGCGGTG A
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Protein sequence | MASGEPFRPA VLEGVLERIT YVNEETGYTV ARVDTGRGSD LVTVVGALLG AHPGESLRME GRWTSHPQYG RQFQVENYTT VLPATVQGIR RYLGSGLVKG IGPRLAEHIV NHFGAAALDV IENSPERLLE VPKLGPKRTK IITEAWEEQK AIKEVMVFLQ TVKVSTSLAV RIYKQYGDDA IRVVREEPYS LAADVWGIGF KTADSIAQAV GIPHDSPQRV KAGIQFTLSE FTNDGHCYLP EDTLINEAVK ILQVDSALVI DCLAELVAEE RVVREKVPDR DGESVTAIYL LPFYRAETAL ANQVRALLHT EHDRLASFAT VDWDRALAWL RSQTGAELAP AQEKAVKLAL TNKVAVLTGG PGCGKSFTVA SIIKLAAAKR AKIMLAAPTG RAAKRLTELT GYDASTVHRL LELKPGGEAA YDRDNPLDCD LLVVDEASML DLLLANKLVK AVPPGAHLLL VGDVDQLPSV GAGQVLRDLL ADGSPVPSVR LTHVFRQAAQ SGVVTNAHRI NTGKPLLLEG MTDFYLFPCE DTEAAAELTV DVVARRIPRR FGLDPRRDIQ VLTPMHRGPA GAGNLNMLLQ EALTPARPGV AERRVGSRVF RVGDKVVQIR NNYDKGANGV FNGTLGTVTA IDLDDQTLTV LTDENEEVGY EFTELDELTH AYALTVHRSQ GSEYPCVVVP VTTSAWMMLQ RNLLYTAVTR AKKLVVLVGS RRAIAQAIRN ASSGRRHTAL DYRLQR
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