Gene Tfu_1752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1752 
Symbol 
ID3580991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2043391 
End bp2045166 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content69% 
IMG OID637685446 
Productprotein phosphatase 2C-like 
Protein accessionYP_289810 
Protein GI72162153 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCCA GATCCCGGAG GCACACCGCC TCCCCCACCA CGTCCCGCAC ATTCGGAGTA 
GACGACCGCA CCGCATCGTC TCCTGACGCT TCCCGACAAT GCACCCTGCT CCGAGACCGC
CTGGGGTTCC TCAACGACGC CACGATGGCG ATCGGCGCCA GCCTCGACCC GGAGAAAACC
GCGTGGGGCC TCGCGGACGC GCTGGTGCCG ACCTTGGCGG ACTTCGCCGT GGTGTACCTG
GCTGACGCGC TGCGCCTGCC CCACGACCTG GACGCCAACC CGCCGGAACT GTTCTCCTCG
TCGCGGCACC TGTGGCAGGC CGCGGTCACC CACGACAACC ATCCGCGCTG GGAGGCCCTG
ACCGTTAAAG ACGACACGTG GTCGCCTGAG CCCACCCACC CGGTATACCG GGCAATGGCC
AGCGGAGACC CGGTCACCTT CAGCGTCGAC GCGGACATTG CCGCTGTCCT CGACAGCAGC
TCAAGGCACG ACCTGGTGGG CTGCTCCCTG CTCGTCGTCC CGCTGAGCGT GCGCGGCCGG
AAACTCGGGT CCGCCGTCGT CGCCCGGCAC CCGGGCAGTC CCGGGTTCAG CGAGGTCGAC
ATCCTCACCG TGCGCCAACT CGCCGCGCAG ACCAGCCTCG GAGTCGACAA CGGCTACCTG
TACCGGGCCC GGTCCCGGGT CGGCGACTGG TTGCAGCGCA GCATGCTGCC GCAACTTCCG
GAACGCCTGT CCAGCGTGGA CATCGCCTAC CGGTATGTCA GCAGCAGCCA CACCGCCCAG
GTCGGCGGCG ACTGGTTCGA TGCGATCCCG CTGCCTGGCA ACCGGGTGGC GCTCGTCGTC
GGCGACGTCA TGGGCCACGG CGTACGGTCC GCTGCGGTCA TGGGCCAGTT CCGGACCGCT
ATGCAGACTT TGGCAGCCAT GGATCTGCCG CCCGACCACG TCCTGCGCCA CCTCGACGAC
CTTGCCCACC AGCTCGGTGA CAGCTACCTT GCCACCTGCC TGTACGCGGT CTACGACCCG
GTCATCCACC GCTGCACTAT CGCAAGCGCC GGGCATGTGC CACCGGTCCT GCTGCGCCAG
GACGGCACCA CGGAGATCCT GCGGACACCC ACGGGAGCAC CGATCGGCCT GGGCGGGGTC
GCGTTCGAAT CCTTCGAGTT CACGGTGGCC GACGGGGACG TGCTCGTGCT GTGCACCGAC
GGGCTGGTCG AAACCCGCAC CCGCGACGTG GAATCCGGGT TGGAGGTGCT CCGCTCCCAC
CTCACCGACC CGCAGCGGCC CGTGGAAGAA CAGTGCCGCA CCCTCCTGCA GGCGTTGAGC
ACACCCGATC AGGAAGACGA CGTGGCGCTG CTGGTGGCCC GCCTGCGCGG GATTCCCAGC
GGCGATTTCG CACAGTGGAT GCTGCAGCCG CGGCCCACCA CTCCCGGGCT TGCCCGCCGC
CTGCTACGCA CCACCCTCGC CGAGTGGGGG TTGGAAGAAA TGACGGACCT CGTGGAATTG
CTCGCCACCG AAGTCATCAC CAACGCGGTC CGCTACGCGT CCCGGCCGAT CGACCTGCGA
CTGCTGCGCA CCGACATCCT GCTGTGCGAG GTCACCGACG ACGACCAGCA CCGCCCCGTG
CTGCGCCAGG CGTCCGCCAC CGACGAGAAC GGGCGGGGCC TGCAACTGGT CAGCCACCTG
TCCCGGCGGT GGGGTGCCAG CGCGAAAACC ACCGGGAAAG TCGTCTGGTT CGAACTGGAC
CTGCCTGAAG GCGCCCGGCG GGGCACCGCA GACTGA
 
Protein sequence
MDSRSRRHTA SPTTSRTFGV DDRTASSPDA SRQCTLLRDR LGFLNDATMA IGASLDPEKT 
AWGLADALVP TLADFAVVYL ADALRLPHDL DANPPELFSS SRHLWQAAVT HDNHPRWEAL
TVKDDTWSPE PTHPVYRAMA SGDPVTFSVD ADIAAVLDSS SRHDLVGCSL LVVPLSVRGR
KLGSAVVARH PGSPGFSEVD ILTVRQLAAQ TSLGVDNGYL YRARSRVGDW LQRSMLPQLP
ERLSSVDIAY RYVSSSHTAQ VGGDWFDAIP LPGNRVALVV GDVMGHGVRS AAVMGQFRTA
MQTLAAMDLP PDHVLRHLDD LAHQLGDSYL ATCLYAVYDP VIHRCTIASA GHVPPVLLRQ
DGTTEILRTP TGAPIGLGGV AFESFEFTVA DGDVLVLCTD GLVETRTRDV ESGLEVLRSH
LTDPQRPVEE QCRTLLQALS TPDQEDDVAL LVARLRGIPS GDFAQWMLQP RPTTPGLARR
LLRTTLAEWG LEEMTDLVEL LATEVITNAV RYASRPIDLR LLRTDILLCE VTDDDQHRPV
LRQASATDEN GRGLQLVSHL SRRWGASAKT TGKVVWFELD LPEGARRGTA D