Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1752 |
Symbol | |
ID | 3580991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 2043391 |
End bp | 2045166 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637685446 |
Product | protein phosphatase 2C-like |
Protein accession | YP_289810 |
Protein GI | 72162153 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTCCA GATCCCGGAG GCACACCGCC TCCCCCACCA CGTCCCGCAC ATTCGGAGTA GACGACCGCA CCGCATCGTC TCCTGACGCT TCCCGACAAT GCACCCTGCT CCGAGACCGC CTGGGGTTCC TCAACGACGC CACGATGGCG ATCGGCGCCA GCCTCGACCC GGAGAAAACC GCGTGGGGCC TCGCGGACGC GCTGGTGCCG ACCTTGGCGG ACTTCGCCGT GGTGTACCTG GCTGACGCGC TGCGCCTGCC CCACGACCTG GACGCCAACC CGCCGGAACT GTTCTCCTCG TCGCGGCACC TGTGGCAGGC CGCGGTCACC CACGACAACC ATCCGCGCTG GGAGGCCCTG ACCGTTAAAG ACGACACGTG GTCGCCTGAG CCCACCCACC CGGTATACCG GGCAATGGCC AGCGGAGACC CGGTCACCTT CAGCGTCGAC GCGGACATTG CCGCTGTCCT CGACAGCAGC TCAAGGCACG ACCTGGTGGG CTGCTCCCTG CTCGTCGTCC CGCTGAGCGT GCGCGGCCGG AAACTCGGGT CCGCCGTCGT CGCCCGGCAC CCGGGCAGTC CCGGGTTCAG CGAGGTCGAC ATCCTCACCG TGCGCCAACT CGCCGCGCAG ACCAGCCTCG GAGTCGACAA CGGCTACCTG TACCGGGCCC GGTCCCGGGT CGGCGACTGG TTGCAGCGCA GCATGCTGCC GCAACTTCCG GAACGCCTGT CCAGCGTGGA CATCGCCTAC CGGTATGTCA GCAGCAGCCA CACCGCCCAG GTCGGCGGCG ACTGGTTCGA TGCGATCCCG CTGCCTGGCA ACCGGGTGGC GCTCGTCGTC GGCGACGTCA TGGGCCACGG CGTACGGTCC GCTGCGGTCA TGGGCCAGTT CCGGACCGCT ATGCAGACTT TGGCAGCCAT GGATCTGCCG CCCGACCACG TCCTGCGCCA CCTCGACGAC CTTGCCCACC AGCTCGGTGA CAGCTACCTT GCCACCTGCC TGTACGCGGT CTACGACCCG GTCATCCACC GCTGCACTAT CGCAAGCGCC GGGCATGTGC CACCGGTCCT GCTGCGCCAG GACGGCACCA CGGAGATCCT GCGGACACCC ACGGGAGCAC CGATCGGCCT GGGCGGGGTC GCGTTCGAAT CCTTCGAGTT CACGGTGGCC GACGGGGACG TGCTCGTGCT GTGCACCGAC GGGCTGGTCG AAACCCGCAC CCGCGACGTG GAATCCGGGT TGGAGGTGCT CCGCTCCCAC CTCACCGACC CGCAGCGGCC CGTGGAAGAA CAGTGCCGCA CCCTCCTGCA GGCGTTGAGC ACACCCGATC AGGAAGACGA CGTGGCGCTG CTGGTGGCCC GCCTGCGCGG GATTCCCAGC GGCGATTTCG CACAGTGGAT GCTGCAGCCG CGGCCCACCA CTCCCGGGCT TGCCCGCCGC CTGCTACGCA CCACCCTCGC CGAGTGGGGG TTGGAAGAAA TGACGGACCT CGTGGAATTG CTCGCCACCG AAGTCATCAC CAACGCGGTC CGCTACGCGT CCCGGCCGAT CGACCTGCGA CTGCTGCGCA CCGACATCCT GCTGTGCGAG GTCACCGACG ACGACCAGCA CCGCCCCGTG CTGCGCCAGG CGTCCGCCAC CGACGAGAAC GGGCGGGGCC TGCAACTGGT CAGCCACCTG TCCCGGCGGT GGGGTGCCAG CGCGAAAACC ACCGGGAAAG TCGTCTGGTT CGAACTGGAC CTGCCTGAAG GCGCCCGGCG GGGCACCGCA GACTGA
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Protein sequence | MDSRSRRHTA SPTTSRTFGV DDRTASSPDA SRQCTLLRDR LGFLNDATMA IGASLDPEKT AWGLADALVP TLADFAVVYL ADALRLPHDL DANPPELFSS SRHLWQAAVT HDNHPRWEAL TVKDDTWSPE PTHPVYRAMA SGDPVTFSVD ADIAAVLDSS SRHDLVGCSL LVVPLSVRGR KLGSAVVARH PGSPGFSEVD ILTVRQLAAQ TSLGVDNGYL YRARSRVGDW LQRSMLPQLP ERLSSVDIAY RYVSSSHTAQ VGGDWFDAIP LPGNRVALVV GDVMGHGVRS AAVMGQFRTA MQTLAAMDLP PDHVLRHLDD LAHQLGDSYL ATCLYAVYDP VIHRCTIASA GHVPPVLLRQ DGTTEILRTP TGAPIGLGGV AFESFEFTVA DGDVLVLCTD GLVETRTRDV ESGLEVLRSH LTDPQRPVEE QCRTLLQALS TPDQEDDVAL LVARLRGIPS GDFAQWMLQP RPTTPGLARR LLRTTLAEWG LEEMTDLVEL LATEVITNAV RYASRPIDLR LLRTDILLCE VTDDDQHRPV LRQASATDEN GRGLQLVSHL SRRWGASAKT TGKVVWFELD LPEGARRGTA D
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