| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1741 |
|---|
| Symbol | |
|---|
| ID | 3580980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 2030385 |
|---|
| End bp | 2031317 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637685435 |
|---|
| Product | threonine dehydratase |
|---|
| Protein accession | YP_289799 |
|---|
| Protein GI | 72162142 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1171] Threonine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0307895 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCAC GCATCACTGT GTCCCGTCAG GTCCCCACGA CCTTCGACGT GCACCTCGCT
GTCCAACGCA CCGCTCCCTA TCTGCGTCGC ACCCCGCTCC TGCGCACTCG TCTGCGGGGC
CGCCCCCTGC TGCTGAAGCT GGAGCATTTG CAGCTCACCG GTGCGTTTAA ACTACGCGGC
GCCTTGAATG CGCTACTCAC CGGGGACAGG GGTGAACGGG TGGTTACCGC CTCGGGTGGC
AACCACGGCC TCGGAGTGGC CACCGCCGCG CACCTGCTCG GCGGTACGGC CACCGTGTAC
GTACCCGAGA CCGTTCCCGC GGTCAAGGAG CGGCGGTTGC GGGACGCCGG TGCCGACGTG
GTTCGGGCCG GCACCGAGTA CGCGGCAGCG GAAGCCGCAG CCCGCGCCTA CGCGGACACC
GAAGGGCTCC GCTACATCCA CGCCTACAAC GACCCGGACG TGGTCGCAGG CCAAGGCACG
CTCGGCCACG AGATCGTCGC CGACGCACCC GACTGCGATG CAGTCGCCGT GGCCGTAGGC
GGCGGCGGTC TCGCCGCAGG CGTGAGCCTG GGCATCGGCG ACGAACGGCT CACCGTCGCG
GTAGAGCCGC GCGGCTGCGC CAGCCTGCAC GCCGCATTCG CCGCCGGCGA GCCCGTGGAC
ACCCCGGTCG ATTCAGTAGC GGCCTCGGCC TTGGGCGCCT CCCGGGTGGG CGACATCCCG
TTCGCGGTAC TGCGCGACCG CAACGTGACC TCCACCCTCG TCTCGGACCC CGAGATCCTT
GCCGCCCGCG ACCTGCTGTG GGAGGAATTC CGGATCGCGG TGGAGCCCGC CGCGGCTACT
CCCATGGCTG CCTGGCTGGC CGGGCACGTC CCCGGCGAAC TGCCGTGCGT GGTGATCTGC
GGCGCCAACG CCGACTGGCG TCCCCTGGAC TGA
|
|---|
| Protein sequence | MTSRITVSRQ VPTTFDVHLA VQRTAPYLRR TPLLRTRLRG RPLLLKLEHL QLTGAFKLRG
ALNALLTGDR GERVVTASGG NHGLGVATAA HLLGGTATVY VPETVPAVKE RRLRDAGADV
VRAGTEYAAA EAAARAYADT EGLRYIHAYN DPDVVAGQGT LGHEIVADAP DCDAVAVAVG
GGGLAAGVSL GIGDERLTVA VEPRGCASLH AAFAAGEPVD TPVDSVAASA LGASRVGDIP
FAVLRDRNVT STLVSDPEIL AARDLLWEEF RIAVEPAAAT PMAAWLAGHV PGELPCVVIC
GANADWRPLD
|
|---|
| |