| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1736 |
|---|
| Symbol | |
|---|
| ID | 3581675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 2022396 |
|---|
| End bp | 2023619 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637685430 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_289794 |
|---|
| Protein GI | 72162137 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2942] N-acyl-D-glucosamine 2-epimerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTGT GGACCGCGCG AGCTGCACAC CGGGCCTGGC TGGACGCCGA GGCGCGCCGC
CTGGTGGACT TTGCCTCTGC TGCCGACCAC CCCGAGCACG GTTTCGCCTG GCTTGACGGG
AGCGGCGCAC CGCTCCCCGA GCAGGGAGTG CACACCTGGA TCACCTGCCG AGTCACCCAC
GTGGCCGCAC TCGCCCACCT GGAAGGGATT CCCGGGGCGA GCGCACTCGC CGACCACGGG
CTGCGGGCCC TGGCGGGGCC GCTGCGCGAC CCGGAGCACG ACGGCTGGTT CACCGCCCTG
GACTCCCGCG GCACGGTCGC CGACTCGCGC AAAGAGGCCT ACCAGCACGC GTTCGTGCTC
CTCGCAGCGG CAAGCGCTAC CGTGGCCGGA CGGCCCGGCG CGCGGGAACT CCTCGACGCC
GCCGCGGCAG TGATCGAACA GCGGTTCTGG GAGGAAGAGA CAGGCCGCTG CCGGGAGAGC
TGGGATGCCG CGTGGCACGC CGACGAGCCC TACCGGGGCG CTAACAGCAA CATGCACCTG
GTAGAAGCGT TCCTCGCGGC GTTCGACGCC ACCGGGGACC GGGTGTGGGC GGAGCGTGCG
CTGCGGATCG CCCACTTCTT CGTCCACGAG GTGGCCGCGC CCCGCGACTG GCGGCTCCCC
GAGCATTTCA CCCCCGACTG GCAGGTCGTG GCCGACTACA ACACCGACGA CCGCGCCCAC
CCGTTCCGCC CCTACGGGGT CACCGTCGGC CACGTCCTGG AATGGGCCCG GCTCCTGGTG
CACGTGGAGG CGGCGCTGCC TGACCCGCCG TCGTGGCTGC TCGCCGACGC GGAGGCGATG
TTCGCCGCCG CCGTGGCACG CGGCTGGTCG GTGGACGGAA CGGAAGGCTT CGTCTACACC
CTCGACTACG ACGACACTCC GGTGGTGCGC TCCCGGATGC ACTGGGTGGT GGCCGAGGCG
ATCTCCGCTG CGGCGGTACT GGGGCAGCGT ACTGGCGACG AGCGCTACGA GCACTGGTAC
CGGACGTGGT GGGACCATGC CGCCACGTAT TTCGTGGACA CCGTGCAGGG CAGTTGGCAC
CACGAGCTCG ACCCGACGCT CGCTCCCCCG CCCGGCGGCA CGTGGAGCGG CAAACCTGAC
GTTTACCACG CCTACCAGGC GACCCGGCTG CCGCTGCTGC CGCTGGCGCC CAGCCTGGCG
GGGGCGCTCG CCACGGTGGG CTGA
|
|---|
| Protein sequence | MTLWTARAAH RAWLDAEARR LVDFASAADH PEHGFAWLDG SGAPLPEQGV HTWITCRVTH
VAALAHLEGI PGASALADHG LRALAGPLRD PEHDGWFTAL DSRGTVADSR KEAYQHAFVL
LAAASATVAG RPGARELLDA AAAVIEQRFW EEETGRCRES WDAAWHADEP YRGANSNMHL
VEAFLAAFDA TGDRVWAERA LRIAHFFVHE VAAPRDWRLP EHFTPDWQVV ADYNTDDRAH
PFRPYGVTVG HVLEWARLLV HVEAALPDPP SWLLADAEAM FAAAVARGWS VDGTEGFVYT
LDYDDTPVVR SRMHWVVAEA ISAAAVLGQR TGDERYEHWY RTWWDHAATY FVDTVQGSWH
HELDPTLAPP PGGTWSGKPD VYHAYQATRL PLLPLAPSLA GALATVG
|
|---|
| |