Gene Tfu_1733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1733 
Symbol 
ID3581672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2016831 
End bp2018675 
Gene Length1845 bp 
Protein Length614 aa 
Translation table11 
GC content69% 
IMG OID637685427 
Productputative acyl-CoA synthetase, long-chain-fatty acid:CoA ligase 
Protein accessionYP_289791 
Protein GI72162134 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.961848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCAGT CACGGACCTC AGATTCACCG CTGCCACGCG TGAACGTGCT GGGCGAGTTG 
GTGTACCTGT GCGCCGAGCG TGACGGCGAC AACGCGGTCC TGCAATGTCC TGACGCGGAT
GGGTGGCGAG ACGTGGGCGC CACCGAGTTC CTGACCTCGG TCACCAAACT GGCGAAAGGA
CTCATCGCCG CGGGCGTCGT ACGTGGCGAC CGGGTACTTG TTGCGGCCCC CGACGGCTAC
GAGCGGACAC TGCTGACTTT TGCGGTGTGG GCCGCAGGCG GAGTGGTGGC GTGGGTACCG
TCCCGGTGCT CGCCAGGGCT GCTGCAGTGG GCGCTGCGGG ACAGCCGTCC CGCGGTCGCA
GTCCTGCGCA ACCAGCGGCA GGCGCGAGTG GCGGCGTCGC TGCAGCACGA GATTGTGGAC
CTGGGACGGG TGTGGGCGTT GGACGAGGGC GGGCTGGACG CGATCGCCAA GCCTGGCGCC
TACATGGACG GCACCGCAGT GCGGTTCCGC GTCGAAGAAG GCAACGCTCA AGACCCGGCA
CTGATCTACT ACACGCCGAC CACGCGGCGG CGGGTGCGGG GCGCGGTGCT GTCCCACCGC
AACCTGCTGG GCGCGGCCAC GGCCCTCATG GAACGGCTCT CCCCGGTGCT GCGGGAGCTG
CGGCCCGCCG ATGCTGTAGC GCTGCTCGGC CCGCAACTCC AAGGATTCGC CACCTGCCTG
GCAGTCGTGG CAGGGACGTT GGCCGGGGTG CGGATCGCTT TCCCCCGACC CGGCGAGGTC
TTCGCCCACC AGGTCCGGGC GTTTGCGCCG ACCCTGCTCG TGGCAGACGC TGAATTCCTG
ACCCGCGTCT ACGAAGTGGA ACGCTCGCGG GCCCAGCAGC AAGGCGGCTG GGACGGCGCC
CAAGGGTTCG AAGCCGCTAC CCGGTTGGCC GTCGACCTGG GCCGGAAGAA ACGGCGCCCC
TGGCAGCGGG TGTCGCGGGC CCTATACGAC TGGGCGTTCG CCCGAGTCCG GGACGCTTTC
GGCGGCCGAC TGCGCGCCGT GGTCTGCCCG CAGGGCGGGA TGGAAGAACA GGTGGCCTAC
TACTACTCGG GCCTGGGGAT CTCTGTGCTG GAAGGCTTCG GCCTGGTGGA GGCCGGAGGG
CTCGCCACCC TGACCGTCCC GGGAGAATGC CGTCCCGGCA CCGTGGGCCC CCCGCTGGAG
GGCACGGAAC TGAAGATCGC TGAGGACAAC GAGATCCTGG TCCGCGGCCC AGGAGTGTTC
ACCGGATACC ACAACGCGAT CTACGACGGC GGCCAGGCAG CGCAAGACGG CTGGCTGGCC
ACGGGCTGGC GCGGGGAGTT GGACGACCGG GGATGGCTGA CCCTGTGGGG CCGGAAGGGA
GACACTCCCT CCCGCAGCGT GGTGGAGGAG CCGCCCGCGG TCGGCAAGGT CGTGGCCGCC
GATTACGCGG TCCTGGAGGC GCGCCTGTTG GAGCATCCGC TGATCAGCCA GGCGATCGTG
CTAGGCGAAG GCCGCCCTTA TGCGACCGCG CTGATCACGT TGAAACGGGA CCAGCTGGAG
TACTGGCGGC TGGTGAACAA CATGCCGTTG ACCACCCCGT TGGAGCAGGT CGCCTTGACC
CCGGAGGTGG GAGAGGAGAT CCGCCGGGTG GTGGAGGAGA TCAACCAGGG CATGCCGCCG
GAGTTGACGA TCCGCGCCTT CCATGTGCTT CCGGAAGAGT TCACCCCGGC GAGCGGGCTG
CTGCTGCCTT CCGGGCGGCT GCGCCGGGAC GCGGTGCTGC GAGCGTTCGC TGAGGAGATC
GAAGCGTTGT ATGCGCCGTC GTCCCAGGAG GAAGGACACC AGTAA
 
Protein sequence
MRQSRTSDSP LPRVNVLGEL VYLCAERDGD NAVLQCPDAD GWRDVGATEF LTSVTKLAKG 
LIAAGVVRGD RVLVAAPDGY ERTLLTFAVW AAGGVVAWVP SRCSPGLLQW ALRDSRPAVA
VLRNQRQARV AASLQHEIVD LGRVWALDEG GLDAIAKPGA YMDGTAVRFR VEEGNAQDPA
LIYYTPTTRR RVRGAVLSHR NLLGAATALM ERLSPVLREL RPADAVALLG PQLQGFATCL
AVVAGTLAGV RIAFPRPGEV FAHQVRAFAP TLLVADAEFL TRVYEVERSR AQQQGGWDGA
QGFEAATRLA VDLGRKKRRP WQRVSRALYD WAFARVRDAF GGRLRAVVCP QGGMEEQVAY
YYSGLGISVL EGFGLVEAGG LATLTVPGEC RPGTVGPPLE GTELKIAEDN EILVRGPGVF
TGYHNAIYDG GQAAQDGWLA TGWRGELDDR GWLTLWGRKG DTPSRSVVEE PPAVGKVVAA
DYAVLEARLL EHPLISQAIV LGEGRPYATA LITLKRDQLE YWRLVNNMPL TTPLEQVALT
PEVGEEIRRV VEEINQGMPP ELTIRAFHVL PEEFTPASGL LLPSGRLRRD AVLRAFAEEI
EALYAPSSQE EGHQ