Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1733 |
Symbol | |
ID | 3581672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 2016831 |
End bp | 2018675 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637685427 |
Product | putative acyl-CoA synthetase, long-chain-fatty acid:CoA ligase |
Protein accession | YP_289791 |
Protein GI | 72162134 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.961848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCAGT CACGGACCTC AGATTCACCG CTGCCACGCG TGAACGTGCT GGGCGAGTTG GTGTACCTGT GCGCCGAGCG TGACGGCGAC AACGCGGTCC TGCAATGTCC TGACGCGGAT GGGTGGCGAG ACGTGGGCGC CACCGAGTTC CTGACCTCGG TCACCAAACT GGCGAAAGGA CTCATCGCCG CGGGCGTCGT ACGTGGCGAC CGGGTACTTG TTGCGGCCCC CGACGGCTAC GAGCGGACAC TGCTGACTTT TGCGGTGTGG GCCGCAGGCG GAGTGGTGGC GTGGGTACCG TCCCGGTGCT CGCCAGGGCT GCTGCAGTGG GCGCTGCGGG ACAGCCGTCC CGCGGTCGCA GTCCTGCGCA ACCAGCGGCA GGCGCGAGTG GCGGCGTCGC TGCAGCACGA GATTGTGGAC CTGGGACGGG TGTGGGCGTT GGACGAGGGC GGGCTGGACG CGATCGCCAA GCCTGGCGCC TACATGGACG GCACCGCAGT GCGGTTCCGC GTCGAAGAAG GCAACGCTCA AGACCCGGCA CTGATCTACT ACACGCCGAC CACGCGGCGG CGGGTGCGGG GCGCGGTGCT GTCCCACCGC AACCTGCTGG GCGCGGCCAC GGCCCTCATG GAACGGCTCT CCCCGGTGCT GCGGGAGCTG CGGCCCGCCG ATGCTGTAGC GCTGCTCGGC CCGCAACTCC AAGGATTCGC CACCTGCCTG GCAGTCGTGG CAGGGACGTT GGCCGGGGTG CGGATCGCTT TCCCCCGACC CGGCGAGGTC TTCGCCCACC AGGTCCGGGC GTTTGCGCCG ACCCTGCTCG TGGCAGACGC TGAATTCCTG ACCCGCGTCT ACGAAGTGGA ACGCTCGCGG GCCCAGCAGC AAGGCGGCTG GGACGGCGCC CAAGGGTTCG AAGCCGCTAC CCGGTTGGCC GTCGACCTGG GCCGGAAGAA ACGGCGCCCC TGGCAGCGGG TGTCGCGGGC CCTATACGAC TGGGCGTTCG CCCGAGTCCG GGACGCTTTC GGCGGCCGAC TGCGCGCCGT GGTCTGCCCG CAGGGCGGGA TGGAAGAACA GGTGGCCTAC TACTACTCGG GCCTGGGGAT CTCTGTGCTG GAAGGCTTCG GCCTGGTGGA GGCCGGAGGG CTCGCCACCC TGACCGTCCC GGGAGAATGC CGTCCCGGCA CCGTGGGCCC CCCGCTGGAG GGCACGGAAC TGAAGATCGC TGAGGACAAC GAGATCCTGG TCCGCGGCCC AGGAGTGTTC ACCGGATACC ACAACGCGAT CTACGACGGC GGCCAGGCAG CGCAAGACGG CTGGCTGGCC ACGGGCTGGC GCGGGGAGTT GGACGACCGG GGATGGCTGA CCCTGTGGGG CCGGAAGGGA GACACTCCCT CCCGCAGCGT GGTGGAGGAG CCGCCCGCGG TCGGCAAGGT CGTGGCCGCC GATTACGCGG TCCTGGAGGC GCGCCTGTTG GAGCATCCGC TGATCAGCCA GGCGATCGTG CTAGGCGAAG GCCGCCCTTA TGCGACCGCG CTGATCACGT TGAAACGGGA CCAGCTGGAG TACTGGCGGC TGGTGAACAA CATGCCGTTG ACCACCCCGT TGGAGCAGGT CGCCTTGACC CCGGAGGTGG GAGAGGAGAT CCGCCGGGTG GTGGAGGAGA TCAACCAGGG CATGCCGCCG GAGTTGACGA TCCGCGCCTT CCATGTGCTT CCGGAAGAGT TCACCCCGGC GAGCGGGCTG CTGCTGCCTT CCGGGCGGCT GCGCCGGGAC GCGGTGCTGC GAGCGTTCGC TGAGGAGATC GAAGCGTTGT ATGCGCCGTC GTCCCAGGAG GAAGGACACC AGTAA
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Protein sequence | MRQSRTSDSP LPRVNVLGEL VYLCAERDGD NAVLQCPDAD GWRDVGATEF LTSVTKLAKG LIAAGVVRGD RVLVAAPDGY ERTLLTFAVW AAGGVVAWVP SRCSPGLLQW ALRDSRPAVA VLRNQRQARV AASLQHEIVD LGRVWALDEG GLDAIAKPGA YMDGTAVRFR VEEGNAQDPA LIYYTPTTRR RVRGAVLSHR NLLGAATALM ERLSPVLREL RPADAVALLG PQLQGFATCL AVVAGTLAGV RIAFPRPGEV FAHQVRAFAP TLLVADAEFL TRVYEVERSR AQQQGGWDGA QGFEAATRLA VDLGRKKRRP WQRVSRALYD WAFARVRDAF GGRLRAVVCP QGGMEEQVAY YYSGLGISVL EGFGLVEAGG LATLTVPGEC RPGTVGPPLE GTELKIAEDN EILVRGPGVF TGYHNAIYDG GQAAQDGWLA TGWRGELDDR GWLTLWGRKG DTPSRSVVEE PPAVGKVVAA DYAVLEARLL EHPLISQAIV LGEGRPYATA LITLKRDQLE YWRLVNNMPL TTPLEQVALT PEVGEEIRRV VEEINQGMPP ELTIRAFHVL PEEFTPASGL LLPSGRLRRD AVLRAFAEEI EALYAPSSQE EGHQ
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