Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1695 |
Symbol | |
ID | 3580876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 1969971 |
End bp | 1971683 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637685389 |
Product | cytochrome-c oxidase |
Protein accession | YP_289753 |
Protein GI | 72162096 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.373959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTGCCT CAGACGTGGT GCAACCGACC ACCGCGGCAC CCCGGAAACG GCCCAAAGGG GCGGTCCTCG CCTCATGGCT GTCCGCCACC GACCACAAGG TCATCGGCTA TCTGTATGTC GCCACCGCGT TCTTCTTCTT CCTGGCGGCC GGCATCATGG CGATGCTGAT CCGGGCCGAA CTGTTGTTCC CCGGCCTGCA GTTGATGAAC AACGAGACCT ACAACCAGTT GTTCACGGTG CACGGCGGCG CCATGCTGCT GCTGTTCGCC ACACCCATGT TCGCCGGGTT CGCCAACCTC GTCGTGCCGC TGCAGATTGG CGCCCCCGAT GTGGCGTTCC CGCGGCTGAA CATGTTCAGC TACTGGCTGT TCTTGTTCGG CGGCCTCACC GTCCTCCTCG GATTCGTCAC CCCCGGAGGT GCGGCGAGCT TCGGCTGGTT CTCCTACGTG CCGCTAGCGG ACGCGGTGCG GTCCCCGGGC ATCGGGGGTG ACCTGTGGGC GCTCGGCCTG ATCGTCGCCG GTCTGGGCAC CATCCTGGGG TCGGTGAACT TCATCACCAC GATCCTGTGC ATGCGCGCCC CCGGCATGAC CATGTTCCGC CTGCCGCTCT TCACCTGGAA CGTGCTGTTC ACCGGGATCC TGGTGCTGCT GTCCTTCCCC GTGTTCACCG GGGCGCTGGT CGGGTTGGCC GCGGACCGGA TCGTGGGGGC GCAGGTGTTC AACCCCGCGG TGGGCGGCCC GGTCATGTAC CAGCACCTGC TGTGGTTCTT CGGCCACCCG GAGGTGTACA TCATCGCGCT GCCGTTCTTC GGCATCGTCA CCGAGGTCAT CCCCGTGTTC AGCCGCAAGC CGCTCTTCGG CTACAAGGGC ATGGTGGGGG CGACCGCGGC GATCACCGGG CTGTCGATGA CCGTGTGGGC GCACCACATG TTCCCCACCG GCGCGGTGCT GCTGCCGTTC TTCTCCTTCA TGACCTTCCT CATCGCGGTG CCGACCGGCG TGAAGTTCTT CAACTGGATC GGCACCATGT GGCGCGGCCA GCTCACCTTC GAAGCGCCGA TGCTGTTCGC TATCGGTTTC CTCGCCACCT TCCTGCTCGG CGGCCTCACC GGGGTGATCC TGGCCTCCCC GCCCATGGAC TTCCACGTCA CCGACTCGTA CTTCGTGGTG GCCCACTTCC ACTACACGGT GTTCGGCACC GTGGTGTTCG CGATGTTCGC GGGCTTCTAC TTCTGGTGGC CGAAGTTCAC CGGCAGGAAG CTCAACGAGA CGCTGGGCAA GTGGCACTTC TGGGTTCTGT TCCTCAGTTT CCAGGGCACG TTTTTGGTAC AGCACTGGCT GGGTGCGGAA GGCATGCCGC GCCGCTACGC GGACTACCTG CCGTCGGACG GGTTCACCCT GCTCAACCAG ATCTCGTCGG TGTCCGCGTT CATCCTGGGC GCGTCCACAC TCATCTTCCT CTACAACGTC TGGTGGACGG CCCGCCACGG CGAGAAGGTC CACGGAGACG ACCCGTGGGG CTACGGCGCC TCCTTGGAGT GGGCGACCTC CTGCCCGCCG CCGCGGCACA ACTTTACGTC GCTGCCGCGG ATCCGTTCTG AGCGGCCCGC CTTCGACCTG CACCACGGCC ACCGGCTGCA TCCCACGCGG GAACCCCTGG TGGGCCAGCA GGAACGAGCC CAGCAGAAAG ACGAAGGCCA GGAACCGTCC TGA
|
Protein sequence | MTASDVVQPT TAAPRKRPKG AVLASWLSAT DHKVIGYLYV ATAFFFFLAA GIMAMLIRAE LLFPGLQLMN NETYNQLFTV HGGAMLLLFA TPMFAGFANL VVPLQIGAPD VAFPRLNMFS YWLFLFGGLT VLLGFVTPGG AASFGWFSYV PLADAVRSPG IGGDLWALGL IVAGLGTILG SVNFITTILC MRAPGMTMFR LPLFTWNVLF TGILVLLSFP VFTGALVGLA ADRIVGAQVF NPAVGGPVMY QHLLWFFGHP EVYIIALPFF GIVTEVIPVF SRKPLFGYKG MVGATAAITG LSMTVWAHHM FPTGAVLLPF FSFMTFLIAV PTGVKFFNWI GTMWRGQLTF EAPMLFAIGF LATFLLGGLT GVILASPPMD FHVTDSYFVV AHFHYTVFGT VVFAMFAGFY FWWPKFTGRK LNETLGKWHF WVLFLSFQGT FLVQHWLGAE GMPRRYADYL PSDGFTLLNQ ISSVSAFILG ASTLIFLYNV WWTARHGEKV HGDDPWGYGA SLEWATSCPP PRHNFTSLPR IRSERPAFDL HHGHRLHPTR EPLVGQQERA QQKDEGQEPS
|
| |