Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1687 |
Symbol | |
ID | 3580868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1960893 |
End bp | 1961669 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637685381 |
Product | 2,5-didehydrogluconate reductase |
Protein accession | YP_289745 |
Protein GI | 72162088 |
COG category | [R] General function prediction only |
COG ID | [COG0656] Aldo/keto reductases, related to diketogulonate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTCC CTACTGTCAC CCTCAACAAC GGGGTCACCA TGCCCCAACT AGGGTTCGGC ACCTGGCAGG TAGGCTACGA CGCGGTCGCT GCGGCGCTGG CGGCCGGGTA CCGCTGCTTC GACACTGCCG AGATGTACCG CAATGAGACT GCGGTCGCCG CGGCGCTCGC TGACTCCGGG CTGGACCGCT CGGACGTGTT CATCACCACC AAACTGTGGA ACAACCACCA CGGATTCCAA CCGGCCTTGG ACGCGTTCCA CGCCAGCCGC CGCAGGCTCG GCCTCGACGT CATCGACCTG TACCTCATCC ACTGGCCCAA CGCGTCCGAT GCAGTCAACG TGGAAACGTG GCGGGCCCTT GAGCAGTTGT ACGCGGAAGG CGTGGTACGC GCGATCGGCG TGTCGAACTT CTCCCCCGCC CAGCTCGCCG TCCTCCTTGA GGCCTGCGAC GTGGTGCCAG CGGTCAACCA GATCGAGCTC AACCCGTCCC GGCCGCGCCT CGAAGAGCGC GTCTACCATG CCCGACACGG CATCGCCACC CAAGCGTGGG CACCGTTGGC GAAAGGGGGA GCCCTGCTCA CCCACCCGGT GATCACTGAG ATCGCGGAAG CCCATCAGAA GACCCCGGCC CAAGTGGTGC TGCGCTGGCA CCTGCAGCAC GGCATCCTGG TCATCCCCCG CTCTGCCACG CCGGAGCGGA TCCGCAGCAA TTTTGCTGTA ACCGACTTCT CCCTCGCCCC GCAGGAGATG GCTGCCGTGG ATGCCCTGGG CGCGTGA
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Protein sequence | MAVPTVTLNN GVTMPQLGFG TWQVGYDAVA AALAAGYRCF DTAEMYRNET AVAAALADSG LDRSDVFITT KLWNNHHGFQ PALDAFHASR RRLGLDVIDL YLIHWPNASD AVNVETWRAL EQLYAEGVVR AIGVSNFSPA QLAVLLEACD VVPAVNQIEL NPSRPRLEER VYHARHGIAT QAWAPLAKGG ALLTHPVITE IAEAHQKTPA QVVLRWHLQH GILVIPRSAT PERIRSNFAV TDFSLAPQEM AAVDALGA
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