Gene Tfu_1687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1687 
Symbol 
ID3580868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp1960893 
End bp1961669 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content66% 
IMG OID637685381 
Product2,5-didehydrogluconate reductase 
Protein accessionYP_289745 
Protein GI72162088 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTCC CTACTGTCAC CCTCAACAAC GGGGTCACCA TGCCCCAACT AGGGTTCGGC 
ACCTGGCAGG TAGGCTACGA CGCGGTCGCT GCGGCGCTGG CGGCCGGGTA CCGCTGCTTC
GACACTGCCG AGATGTACCG CAATGAGACT GCGGTCGCCG CGGCGCTCGC TGACTCCGGG
CTGGACCGCT CGGACGTGTT CATCACCACC AAACTGTGGA ACAACCACCA CGGATTCCAA
CCGGCCTTGG ACGCGTTCCA CGCCAGCCGC CGCAGGCTCG GCCTCGACGT CATCGACCTG
TACCTCATCC ACTGGCCCAA CGCGTCCGAT GCAGTCAACG TGGAAACGTG GCGGGCCCTT
GAGCAGTTGT ACGCGGAAGG CGTGGTACGC GCGATCGGCG TGTCGAACTT CTCCCCCGCC
CAGCTCGCCG TCCTCCTTGA GGCCTGCGAC GTGGTGCCAG CGGTCAACCA GATCGAGCTC
AACCCGTCCC GGCCGCGCCT CGAAGAGCGC GTCTACCATG CCCGACACGG CATCGCCACC
CAAGCGTGGG CACCGTTGGC GAAAGGGGGA GCCCTGCTCA CCCACCCGGT GATCACTGAG
ATCGCGGAAG CCCATCAGAA GACCCCGGCC CAAGTGGTGC TGCGCTGGCA CCTGCAGCAC
GGCATCCTGG TCATCCCCCG CTCTGCCACG CCGGAGCGGA TCCGCAGCAA TTTTGCTGTA
ACCGACTTCT CCCTCGCCCC GCAGGAGATG GCTGCCGTGG ATGCCCTGGG CGCGTGA
 
Protein sequence
MAVPTVTLNN GVTMPQLGFG TWQVGYDAVA AALAAGYRCF DTAEMYRNET AVAAALADSG 
LDRSDVFITT KLWNNHHGFQ PALDAFHASR RRLGLDVIDL YLIHWPNASD AVNVETWRAL
EQLYAEGVVR AIGVSNFSPA QLAVLLEACD VVPAVNQIEL NPSRPRLEER VYHARHGIAT
QAWAPLAKGG ALLTHPVITE IAEAHQKTPA QVVLRWHLQH GILVIPRSAT PERIRSNFAV
TDFSLAPQEM AAVDALGA