Gene Tfu_1683 details

Gene Information

• Locus tag: Tfu_1683
• ID: 3580864
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 1956902
• End bp: 1957519
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637685377
• Product: 16S rRNA m(2)G 1207 methyltransferase
• Protein accession: YP_289741
• Protein GI: 72162084
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG2813] 16S RNA G1207 methylase RsmC

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCCTCGC ACTACTTCGA CTCTGATCCG ACCGCGCCCA GCCGCACCGC CACCGTGACC 
CTGCTCCTCC CCGACCTGCA CCTGCGGCTC GCCACCGACC GGGGCGTCTT CTCCCCCGAC 
CGGATCGACC TTGGCACACG GATCCTGCTC GAGACCGTTC CCCCACCTCC CGACCACGGC 
ACTCTGCTCG ACCTCGGCTG CGGCTACGGC CCCATTGCGC TGGCCATGGC ACTGCGCGCC 
CCGAAAGCCA CCGTCGTGGG GATCGACACC AACCAGCGCG CCCTCGCGCT GGCACGCCGC 
AATGCGGAAG CCAACGCTGT CCCCAACGTC TCCTTCCACC GCGCGCCCGG CCCCGAGGAC 
CCCGTGGACC CGCTCCTGCG CGGCCCGTTC GCCGCCCTGT GGTCCAACCC GCCCATCCGC 
ATCGGCAAAC AGGCCCTGCA CACCCTGCTG ACCACGTGGC TGGACCGCCT CGCCGACGGC 
GCGTACGCCC ACTCTGTCGT GCACAAGCAC CTCGGCGCCG ACTCGCTACA CCGCTGGCTG 
GACGCCTCCG GCTACCCCAC GGACCGAGTC GCTTCCCGCG CCGGTTATAG AATCCTGCGC 
ACCATGCGCC GACCCTGA 

 

Protein sequence

MASHYFDSDP TAPSRTATVT LLLPDLHLRL ATDRGVFSPD RIDLGTRILL ETVPPPPDHG 
TLLDLGCGYG PIALAMALRA PKATVVGIDT NQRALALARR NAEANAVPNV SFHRAPGPED 
PVDPLLRGPF AALWSNPPIR IGKQALHTLL TTWLDRLADG AYAHSVVHKH LGADSLHRWL 
DASGYPTDRV ASRAGYRILR TMRRP