| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1680 |
|---|
| Symbol | |
|---|
| ID | 3580861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 1953749 |
|---|
| End bp | 1954558 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637685374 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_289738 |
|---|
| Protein GI | 72162081 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTACTC CCGGTCCTCA GCCTGTGCGC CGGACCACCG CCCATCTGTT ACCGACCACC
GCTGACGGGG GCGTGCACGC CCCCACTGCC ACGCTGGTGT CGGTACGCCT CGATTTCGGC
GACGATCCGG CGGCCCGGTT GCGCGAAGCG GCGCGGCTTC CTGCCGCTGC ACCGCTGACC
GCGGTCGACG TCCGCACCGA GACGGTCACC GTCCAGCACG GTGACCACGT GCTCGACATG
CACATCGACC GGATCTACTA CGCCACTCCC ACCACGTCCC CGGCAACCCA CTCCCTCGCG
GAAGCCCTGG CCCTGCCCAG TCGGCCCACC CCCGAGGAAC TGGTCCCCGA GGAGGTCCTT
CCCGCTACGG CGCTCCGCCG TTTCGCGGTC TACGGACTGG TCACCGACCC GGCGGCGCGG
CTCCTCCTGT CCCGGATCGC TCCCGGCTAT CCCGGGGAAG GCACCTGGCA CCTGCCGGGT
GGCGGAGTCG CCCACGGGGA GGACATCCGT ACCGCCTTGA TCCGTGAGAT CGCTGAGGAG
AGCAGCCAGG AAGCCCAGCC GGGACGGCTG CTCGCGGTCA CCCACCACTA TCGCAACCAC
CCGGACGGCC CCTACACCGA CATCTACTCC CTGTGGGTGT TCTTCCACGC GCACGTCGAC
GACCCAGGCC CGGTCCGGGT AGCAGAGACG GACGGCTCCA CTATCGAGGC GTCCTGGTTC
TCCCCGGAAC AGTTGCCGCA CCTGCGTCTC TCCGTGCCGG CGCGGCGCGG CCTGGCTTTC
CTCGTGGAGT CCTCTCCAGC TGGGCGATAA
|
|---|
| Protein sequence | MSTPGPQPVR RTTAHLLPTT ADGGVHAPTA TLVSVRLDFG DDPAARLREA ARLPAAAPLT
AVDVRTETVT VQHGDHVLDM HIDRIYYATP TTSPATHSLA EALALPSRPT PEELVPEEVL
PATALRRFAV YGLVTDPAAR LLLSRIAPGY PGEGTWHLPG GGVAHGEDIR TALIREIAEE
SSQEAQPGRL LAVTHHYRNH PDGPYTDIYS LWVFFHAHVD DPGPVRVAET DGSTIEASWF
SPEQLPHLRL SVPARRGLAF LVESSPAGR
|
|---|
| |