Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1673 |
Symbol | |
ID | 3581293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 1946306 |
End bp | 1947880 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637685367 |
Product | phosphodiesterase/alkaline phosphatase D |
Protein accession | YP_289731 |
Protein GI | 72162074 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGCGTC GCACGCTCTC TGCAGTCCCG CCGTCCCGAC GCCGCTTCCT GGGCATCGGT GCTGCCTCTG CGGCCGCCGT AGCCCTGGGG ACCGGTCTGT TTCCCGCCCC GTCCCACCGC TCCGCCTCCG CCAGCTCCTA CCCTTTCACC CTTGGGGTCG CCTCCGGGGA CCCGCACCCC GACGGGGTCG TCCTGTGGAC CCGCCTGGCC CCCGACCCGC TCGCCCCCGA CGGCCGGGGC GGCATGGGCG ACGAGGAGGT TACGGTCCGC TACCAGGTTG CAACAGACGA GCGCTTCAGC CGCGTGGTCC ACGAGGGAGA AGCCGTCGCC TCCCCCGAAC TCGCCCACTC CGTCCACCCC GAGATCACCG GTTTGGAACC GGACCGCGAA TACTTCTACC GGTTCCAAGC CCTGGGGGAG ATCAGCCCGG TAGGGCGCAC CCGCACCGCA CCCGACCCCC GAACCGAGCC GGCTCTGCTC CGGTTCGCCT TCGTCTCCTG CCAGAAGTGG GACGACGGCT ACTACACCGC CTACCGCCAC CTGGCCGAAG AAGACCTGGA CCTCGTCGTG CACTTGGGCG ACTACCTCTA CGAGTACCCG GTAAGCGGAG CCATCCGCCA GGTCGAGATC CCCGACTACC TGGCCACCGA GACGGAGACT CTCGAGCAGT ACCGGGTGCG CTACGGCCTG TACAAGAGCG ACCCCGACCT GCAGGCGGCG CACGCTCGCT TCCCGTGGAT CGCCGTGCTC GACGACCACG AAGTTAAGAA CAACTGGGCC GGGGCCCACA CCGGTGAGGC CGAGCTGGCC CGCCGCGCGG CCGCATTTCA GGCGTACTAC GAGAACCTGC CGCTGCGCCG CTCCGCCCTC CCCGTCGGGC CTGCCATGGG ACTGCACCGC CGGATCTCGT GGGGCCAGTT GGCGGATTTC ACGATCCTCG ACACCCGCCA GTACCGCGAC GCCCACGCCT GCCACGACGG AAAGTCCGCC ACCTGCTCTG CACGGCTCAA CCCCGGCCGC AGCCTGCTCG GCACGGAGCA GCGCGAGTGG TTGCTGCACG GGTTCGAGAC CTCGCCCGCC CGCTGGCACG TGCTGGGCAA CCAAGTGCCG ATGACGCAGA GCGACCTCGA TCCGGGGCCT GCGACCCGGG TGTGGTTGGA CTCCTGGGAC GGCTATGTCG CAGAGCGCGA CCTGGTGCTG GCCGAGGCTG CGGCACGCGG GGTACGCAAC CTGGTGGTGG TGACGGGAGA CCGGCACCAG AACTACGCGG CCGAACTCAA AGCCGACTAC GCCGACCCGG ATTCTGCGAC CGTGGGCACG GAATTCGTCG GCACCTCGAT CAGTAGCAGC CAGGACGGGC AGGACCTGGG GGAACAAGGG CAGGCTCTGC TCGCGGCCAA CCCGCACCTG CGGTTCGTCA ACGAGCAGCG CGGCTATGCG CGGTGCTTCG TGACCCCCGA GCTGTGGCAG ACCGACTTCC GCGTGGTGCC GTACGTGACC TCACCCGGGG CTCCCGTCTC CACCCGGGCG TCTTTTGTCG TCGAAGACGG GCATCCCGGG CTGCTCGAAG GGTGA
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Protein sequence | MVRRTLSAVP PSRRRFLGIG AASAAAVALG TGLFPAPSHR SASASSYPFT LGVASGDPHP DGVVLWTRLA PDPLAPDGRG GMGDEEVTVR YQVATDERFS RVVHEGEAVA SPELAHSVHP EITGLEPDRE YFYRFQALGE ISPVGRTRTA PDPRTEPALL RFAFVSCQKW DDGYYTAYRH LAEEDLDLVV HLGDYLYEYP VSGAIRQVEI PDYLATETET LEQYRVRYGL YKSDPDLQAA HARFPWIAVL DDHEVKNNWA GAHTGEAELA RRAAAFQAYY ENLPLRRSAL PVGPAMGLHR RISWGQLADF TILDTRQYRD AHACHDGKSA TCSARLNPGR SLLGTEQREW LLHGFETSPA RWHVLGNQVP MTQSDLDPGP ATRVWLDSWD GYVAERDLVL AEAAARGVRN LVVVTGDRHQ NYAAELKADY ADPDSATVGT EFVGTSISSS QDGQDLGEQG QALLAANPHL RFVNEQRGYA RCFVTPELWQ TDFRVVPYVT SPGAPVSTRA SFVVEDGHPG LLEG
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