Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1665 |
Symbol | |
ID | 3581285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1936330 |
End bp | 1937646 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637685359 |
Product | cellulose-binding family II protein |
Protein accession | YP_289723 |
Protein GI | 72162066 |
COG category | [S] Function unknown |
COG ID | [COG3397] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.862652 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGAATGA GAAGCCGGCT CGCTGCTTTT GGCGCACTCG CTGGCTTGAC TGCAACCCTC GCCGCCGTCA CACCGGCCGA GGATGCTTAC GCGCACGGCG CGATGACCTA CCCCCCGACG CGTAGCTACA TCTGCTACGT CAACGGCATC GAGGGGGGCC AGGGCGGCAA CATCGCGCCC ACCAACCCCG CTTGCCAGAA CCTGCTTGCG GAGAACGGCA ACTACCCGTT CTACAACTGG TTCGGCAACC TCATCAGCGA CGCTGGTGGC CGGCACCGCG AGATCATCCC GGACGGCCAG CTCTGCGGCC CCCACCCGCA GTTCAGCGGC CTGAACCTGG TCAGCGAGCA CTGGCCCACC ACCACGCTGG TGGCCGGAAG CACCATCACC TTCCAGTACA ACGCCTGGGC ACCGCACCCC GGCACCTGGT ACCTGTACGT CACCAAGGAT GGCTGGGATC CCAACTCCCC GCTGGGTTGG GACGACCTGG AGCCTGTTCC CTTCCACACG GTCACCGACC CGCCGATCCG TCCTGGTGGC CCCGAGGGAC CGGAGTACTA CTGGGACGCC ACGCTGCCTA ACAAGTCGGG CCGCCACATC ATCTACTCGA TCTGGCAGCG CTCCGACAGC CCGGAGGCCT TCTACGACTG CACCGACGTG GTGTTCGTCG GCGGCGGCGA CGACGGCGGT TCGGGCGGTC CTCAGCCGGA CACTGAGGCG CCCACTGCTC CCGGCACCCC GGTGGCTGGT TCCCTGAACG GCACCTCCGC CCAGATCAGC TGGCCTGCTG CAACCGACAA CGTCGGTGTC GCCGAGTACC GGGTGTACAA CGCGGCCAAC GACGAGCTGC TGGCCACGAC TCGCACCACC AGCGTCACCC TCACCGGGCT GACGCCGAAC ACCGACTACT CGATCTACGT CGTGGCGCGC GACGCGGCGG GCAACACCTC GAGCCCGTCG GCGACGCTGA CCTTCAACTC GGGTGACGCT CCCGCGCTCG CCTGCGAGAT CGAGTACAGC ACACCCAACA CCTGGTACGG CGGATTCACC GCCCAGGTGC GGATCTACAA CGGCAGCCAC GAGTCCATCG ACGGCTGGGA ACTGACGTGG GACTTCACCA ACGGTGAGAC CATCAACCAG GCGTGGAACG CCACTGCCCA GCAGTCCGGA ACCACCGTGA CGGTCACCAA CGTCTCGTGG AACAGCACCA TTCCGCACCA CGGCTCGGTG GAGTTCGGCT TCAACGCCAA CTCCACGCGG GAGCCGGGAG TGCCGGAGAA CTTCAAGCTC AACGGCAGCC TCTGCTCCGT GGCCTAA
|
Protein sequence | MRMRSRLAAF GALAGLTATL AAVTPAEDAY AHGAMTYPPT RSYICYVNGI EGGQGGNIAP TNPACQNLLA ENGNYPFYNW FGNLISDAGG RHREIIPDGQ LCGPHPQFSG LNLVSEHWPT TTLVAGSTIT FQYNAWAPHP GTWYLYVTKD GWDPNSPLGW DDLEPVPFHT VTDPPIRPGG PEGPEYYWDA TLPNKSGRHI IYSIWQRSDS PEAFYDCTDV VFVGGGDDGG SGGPQPDTEA PTAPGTPVAG SLNGTSAQIS WPAATDNVGV AEYRVYNAAN DELLATTRTT SVTLTGLTPN TDYSIYVVAR DAAGNTSSPS ATLTFNSGDA PALACEIEYS TPNTWYGGFT AQVRIYNGSH ESIDGWELTW DFTNGETINQ AWNATAQQSG TTVTVTNVSW NSTIPHHGSV EFGFNANSTR EPGVPENFKL NGSLCSVA
|
| |