Gene Tfu_1664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1664 
Symbol 
ID3581284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp1935226 
End bp1935915 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content66% 
IMG OID637685358 
Productiron dependent repressor 
Protein accessionYP_289722 
Protein GI72162065 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.25936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCCTG TTGCGAACCG GCCGTCAACG TCGGTCGAGG ACTACGTCAA GGTCATCTAC 
GACCTTCAGG AACGCGGAAG TGGCCCAGTC ACCATTTCCC GGGTCGCCGA GCGGCTCGCC 
GTGTCCAACT CCTCGGTCTC CGGCATGCTG CGCAAACTCG GTGAACTGGG GCTGGTCGAC 
CACCAGCGCT ACGGCGACGT GCGACTGACC CCCACGGGAG ACAAGGTCGC CTTGGCCGTA 
CTGCGCCGTC ACCGACTGAT CGAGCTCTAC CTCGTGGAGG AACTCGGGTA CTCCTGGGAC 
GAGGTCCACG ACGAGGCGGA GGTCCTCGAA CACGTCGTCT CGGACCGTTT TGTGGAACGT 
ATCGCCGAAC GCCTGGGCCA TCCCACGGTC GACCCGCACG GCGACCCCAT TCCGACCAGC 
GACGGCCGCG TTCCGACACA GGAGACCCGC CTGCTGGCCC ACGTGGACCC GGGAAGCGGG 
GGGACGATCG TCCGTGTCAA CGACTCCGAC CCGGCGCTGC TGCGCTACCT GGCCAGCCAG 
CACATCGGCA TCGGCATGCG GATCGAGCTT GTGGAACGTC AACCTTTCGG CGGCCCTCTC 
GTCGTGCGTT TGCACACCGA CGAAGGGGTT GAAGAGCGGT CCATCGGCAC GGGGGTCGCC 
GAAGCGCTCT GGATCGCGAC AGACCACTAA
 
Protein sequence
MAPVANRPST SVEDYVKVIY DLQERGSGPV TISRVAERLA VSNSSVSGML RKLGELGLVD 
HQRYGDVRLT PTGDKVALAV LRRHRLIELY LVEELGYSWD EVHDEAEVLE HVVSDRFVER 
IAERLGHPTV DPHGDPIPTS DGRVPTQETR LLAHVDPGSG GTIVRVNDSD PALLRYLASQ 
HIGIGMRIEL VERQPFGGPL VVRLHTDEGV EERSIGTGVA EALWIATDH