| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1662 |
|---|
| Symbol | |
|---|
| ID | 3581282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 1933486 |
|---|
| End bp | 1934217 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637685356 |
|---|
| Product | ABC-type Mn/Zn transport systems ATPase component |
|---|
| Protein accession | YP_289720 |
|---|
| Protein GI | 72162063 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.184218 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCACCC CGCCCGCACT CGAAGTCCGC GAGGTCACCG TCCGCTACGG CGACGTCCTG
GCACTCGACA ACGTCACCGT GGAGATTGGA CGCGGCGTCG TGTGCGGCCT GCTCGGCGCC
AACGGCTCCG GCAAGTCCAC CCTGCTGAAA ACCATCGCGG AACTCGTCAC CCCGCAGAGC
GGACACGTGC GGATCCACGG CCTACCGCCC GCCCAGGCCC GCAAAAACGG CCTGCTGGGC
TACGTCCCCC AGTCCGAACA GGTGGACTGG GCCTTCCCAG TGCGGGTGAT CGACGTGGTG
ATGATGGGAC GCTACGGTCA CATGGGCCTT ACCCGCCGAC CCCGCAAGTC CGACCGTGAC
GCGGTAGCCG AAGCCCTCGA ACGCACCGGA CTCACCGACC TGGCCCACCG GCAGATCGGA
GCCCTCTCCG GCGGCCAGCG GAAACGCGCG TTCATCGCCC GCGGCATCGC CCAAGGCGCC
ACCGTGTTCC TGCTGGACGA GCCGTTCGCG GGCGTAGACA AGCCCTCAGA ACGCACCATC
GTTCGCGTGC TGCGGGAGAT GCGCGACGAA GGAGCCACCC TGCTGGTCTC CACCCACGAC
CTGGCCGGAG TGGGGGAGCT GTGCGACGAA GCCATCCTGC TGCACCGGCG CGTCCTGGCC
CACGGCAGCC CGGACCGCGT CCTCGTACCC GAGCTGATGC TCCGCGCTTT CGGACTAGAG
GAGCCCGCAT GA
|
|---|
| Protein sequence | MTTPPALEVR EVTVRYGDVL ALDNVTVEIG RGVVCGLLGA NGSGKSTLLK TIAELVTPQS
GHVRIHGLPP AQARKNGLLG YVPQSEQVDW AFPVRVIDVV MMGRYGHMGL TRRPRKSDRD
AVAEALERTG LTDLAHRQIG ALSGGQRKRA FIARGIAQGA TVFLLDEPFA GVDKPSERTI
VRVLREMRDE GATLLVSTHD LAGVGELCDE AILLHRRVLA HGSPDRVLVP ELMLRAFGLE
EPA
|
|---|
| |