Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1649 |
Symbol | |
ID | 3580485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1919091 |
End bp | 1920758 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637685343 |
Product | catalase |
Protein accession | YP_289707 |
Protein GI | 72162050 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0753] Catalase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0672008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGGGAA GAGGTGGGCG CCTCCCTCCG GGGAAGTGTC GGGTTGGCCC CGCACATTGG CCCAGCCGAC TCTCGTCCGC TGAGGTGAGC CCCACCACGC GGGCACTGTC GCGCCACACC GGAACTTCCG GGCCGGCGCC GTCCCGATCT CTACCAGCCA TATCCACGAT CAAGGAGACC GACTTGACCG AGACCAACGA GGCACTGTCC ACTGCGAGCA ACGCCACGGG CTCCACGCTC GACTCTGGTG CGCCTGCGGC TAGCGACCGC AACTCGCTGA GCGTGGGCAG CAACGGCCCG CTGCTGCTGC ACGACGTACG GCTCGTTGAG ACGCTCGCCC ACTTCAACCG TGAGCGGGTC CCCGAGCGCA ACCCGCACGC CAAGGGCGCC GGTGCCTTCG GTGTCTTCGA AACCACGGAG GACGTCTCCC AGTACACCAA GGCTGCCCTG TTCCAGAAGG GTGCCCGTAC CGAGATGCTC GCCCGGTTCT CCACGGTCGC TGGTGAGCAG GGCTCCCCGG ACACCTGGCG GGACGTGCGC GGTTTCGCTC TGAAGTTCTA CACCTCTGAG GGCAACTACG ACCTGGTCGG CAACAACACG CCGATCTTCT TCGTCCGCGA CCCGATGAAG TTCCCGCACT TCATCCGCTC CCAGAAGCGG ATGCCGGACA CGGGTCTGCG CGACAACAAC ATGCAGTGGG ACTTCTGGAC CCTCAACCCG GAGACCGCCC ACCAGGTCAC CTACCTCATG GGTGACCGCG GCCTGCCGCG GACCTGGCGC CACATGAACG GCTACGGTTC GCACACCTAC ATGTGGATCA ACGCCAAGGG CGAGAAGTTC TGGGTCAAGT ACCACTTCAA AACCGACCAG GGCATCGAGA ACATGACCAA CGAGGAAGCC GAGCGTCTCG CCGGTGTGGA CGCCGACTTC CACCGTCGTG ACCTGGTCGA GGCCATCGAA CGCGGGGACT ACCCGAGCTG GACCCTCTAC GTGCAGGTCA TGCCGTACGA GGACGCCAAG ACCTACCGGT TCAACCCGTT CGACCTGACC AAGGTCTGGC CGCACAGCGA CTACCCGCTC ATCAAGGTCG GCAAGATGAC CTTGAACCGC AACCCGGAGA ACTTCTTCGC CGAGATCGAG CAGGCCGCGT TCGCGCCGTC GAACCTGGTC CCGGGTATCG GCGTCTCCCC GGACAAGATG CTGCTGGGCC GCGTCTTCGC CTACGCGGAC GCCCACCGGG CCCGGATCGG CACCAACTAC TTCCAGCTGC CGGTGAACAA GCCGCGGGTG AAGGTCAACT CCTACACCTT CGACGGGCAC ATGACCTACG AGCACTCCGG CAAGGCCCCG GTGTACGCGC CCAACTCCTA CGGCCGTCCC TGGTCTGACC AGACCGGCCC GGTCGAGGAC AGCTGGGAGG CCGACGGCGA GCTGGTGCGC AGCGCCTACG AGCTGCACGC TGAGGACGAC GACTTCTCGC AGGCCGGCAC CCTGGTCCGC GAGGTCTTCG ACGACGCCCA GCGGGACCGG CTCGTGGAGA CGGTCGCCGA CCACCTGTCC AAGGGTGTCG TCGAGCCGGT GCTCTCCCGG GCCTTCCAGT ACTGGAAGAA CATCGACGAG ACCATCGGCG AGCGGATCGA GAAGCGGTAC CACGAGATCG CTCGGTGA
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Protein sequence | MLGRGGRLPP GKCRVGPAHW PSRLSSAEVS PTTRALSRHT GTSGPAPSRS LPAISTIKET DLTETNEALS TASNATGSTL DSGAPAASDR NSLSVGSNGP LLLHDVRLVE TLAHFNRERV PERNPHAKGA GAFGVFETTE DVSQYTKAAL FQKGARTEML ARFSTVAGEQ GSPDTWRDVR GFALKFYTSE GNYDLVGNNT PIFFVRDPMK FPHFIRSQKR MPDTGLRDNN MQWDFWTLNP ETAHQVTYLM GDRGLPRTWR HMNGYGSHTY MWINAKGEKF WVKYHFKTDQ GIENMTNEEA ERLAGVDADF HRRDLVEAIE RGDYPSWTLY VQVMPYEDAK TYRFNPFDLT KVWPHSDYPL IKVGKMTLNR NPENFFAEIE QAAFAPSNLV PGIGVSPDKM LLGRVFAYAD AHRARIGTNY FQLPVNKPRV KVNSYTFDGH MTYEHSGKAP VYAPNSYGRP WSDQTGPVED SWEADGELVR SAYELHAEDD DFSQAGTLVR EVFDDAQRDR LVETVADHLS KGVVEPVLSR AFQYWKNIDE TIGERIEKRY HEIAR
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