Gene Tfu_1646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1646 
Symbol 
ID3580482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp1915725 
End bp1916426 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content68% 
IMG OID637685340 
ProductTetR family transcriptional regulator 
Protein accessionYP_289704 
Protein GI72162047 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGGC GTACGGAGGG CCGCGGGGTT GTTGCCGCGG CGCTGCGACT ATTCGACGAG 
AAAGGCTTCG AAGCGACCAC GATGGACGAC GTCGCGGTCG CCGCCGGAGT GAGCCGCAGC 
ACCCTGTTTC GGCGCTTCGG GTCTAAAGAC GACCTGCTCT TCGCTGACCA AGAAGAGCTG 
GTGGAGGCGG TGCGCACCCA TCTCGCCTCC TCGCCCGAAG ACCCAGTGAG CGCCGTGTGC 
TCGGCGGCGC GCATGGTGCT CCGCTCCTAC ACCAGCCAGC CCGACCTGGC CGTGCGCCGC 
TATCGCCTGG TGCGGACCCG TCCTGCGCTA CGGGACCGCG AAATCGCAAT GACGGCGCGC 
TACCAGTCGC TCTTCACCCA GCACCTGACC GGCGGGCACA GTGACGAGTC GCGGGTGCTC 
GCCGCGGAAG TAGTGGCTGC GGCAGTAATT GCCGCGCACA ACCATGTGCT ACGGATGTGG 
CTGCGCGCTC CGGAAGTCAC GTCGCCTTCG CCGCTGGAGC GGCTCGACCA GGCCTTGGCG 
TTCGTCGTGG ACATGATGGC GCCCGCACTA CGCCGCAGCG GTGAGCAGCG GTCGGATGAG 
CGGGGGGACC GTGCGGTGCT TGTGGCGGTC TACCCAGCGG GGGCGTCCCA CGAAGAAGTG 
CTGGCACGGG TCCGCGCGGC CTTGGAATCA CCGCGGAACT AA
 
Protein sequence
MAGRTEGRGV VAAALRLFDE KGFEATTMDD VAVAAGVSRS TLFRRFGSKD DLLFADQEEL 
VEAVRTHLAS SPEDPVSAVC SAARMVLRSY TSQPDLAVRR YRLVRTRPAL RDREIAMTAR 
YQSLFTQHLT GGHSDESRVL AAEVVAAAVI AAHNHVLRMW LRAPEVTSPS PLERLDQALA 
FVVDMMAPAL RRSGEQRSDE RGDRAVLVAV YPAGASHEEV LARVRAALES PRN