| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1640 |
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| Symbol | |
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| ID | 3580476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1906928 |
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| End bp | 1907917 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637685334 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_289698 |
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| Protein GI | 72162041 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCACAG CAGAACAGGG ACGAAGAGAG GGCAGGACCG TGGCCGACCT GAACCGGGTG
CTCGTGCTAG CCGGAGGGTT GTCACCCGAA CACGAGGTGT CGGTGCGCTC CGGTCGGCGT
GTCGCTGAGG CGCTGCGCCG TCTCGACGTG GAGGTGCAGA CCTGCGATGT CGGTCCTGAG
CTGCTCAATC TGCTGACGGA TGATCCGCCG CAGGTGGTGT TCCCGGTGCT CCACGGCACG
TCCGGGGAGG ATGGGGCGAT CCGCGAAGTC CTGGAGCTGG CCGGGGTCCC CTATGTGGGT
GCCCGTCCCG ATGCCTGCCG GGCCACCTAC GCTAAACCGA TCGCGAAGAC CCTCGTCGCC
GAGCAGGGGA TTGCCGTGCC GCGTGGACTG GCGCTCCCCA AGTCGCTCTT CCACGACCTG
GGTGCCCACG CGGTCTTGGA GCGCATCGTG GCGATGCTGG GGCTGCCGCT GTTTGTGAAA
CCCGCCCAGG GCGGTTCCGC GTTCGGGGCG ACGGCCGTCA CGGAAGCGTC CGCGCTGCCC
GCGGCCCTGG TGAGCTGCTT TGCCTACAGC GACACCGCGC TGATCGAACA GCAGGTGACG
GGGGTCGAAG TCGCGGTTGG CGTGCTTGAC CTGGGGGACG GCCCGGTGGC GCTGCCCGCC
GTGGAGATCG TGCCGGACGG AGGTGTCTAC GACTACGCGG CCCGCTACAC CGCGGGACGC
ACCGAGTTCT TCAGCCCGGC CCGGCTCTCC GACGAGGTGG CGCGCGCTGC CGCGGATGCG
GCGGTCACCG CGCACCGCGC CCTTGGGCTG CGGGACGTTT CCCGCACCGA CCTCATCATC
GATGAGACTG GGCGCGTCTA CTTCCTCGAG GTCAACGTCT CTCCGGGAAT GACCGACACG
TCCACGCTGC CGCTGGCTGT GGAGGCCGCG GGAATGGACT TCGCGGTGGT CTGCCGTGAA
CTGGCCCACC GCGCCCTGCT GCGGGGCTGA
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| Protein sequence | MTTAEQGRRE GRTVADLNRV LVLAGGLSPE HEVSVRSGRR VAEALRRLDV EVQTCDVGPE
LLNLLTDDPP QVVFPVLHGT SGEDGAIREV LELAGVPYVG ARPDACRATY AKPIAKTLVA
EQGIAVPRGL ALPKSLFHDL GAHAVLERIV AMLGLPLFVK PAQGGSAFGA TAVTEASALP
AALVSCFAYS DTALIEQQVT GVEVAVGVLD LGDGPVALPA VEIVPDGGVY DYAARYTAGR
TEFFSPARLS DEVARAAADA AVTAHRALGL RDVSRTDLII DETGRVYFLE VNVSPGMTDT
STLPLAVEAA GMDFAVVCRE LAHRALLRG
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