| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1631 |
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| Symbol | |
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| ID | 3580409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1896339 |
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| End bp | 1897277 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637685325 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_289689 |
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| Protein GI | 72162032 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0718199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGACC TCCACCCGCC CGCCAGCACC CCCGCCCCGT CTGCGAGCGC GGCATCACCT
GATCCTGTCG ACCGCAGTGC CGAGCACGGG CAACTCCGCA TGGTCGCCAC CCGGTTTCTC
CGCCACCGCA TGGCCATGGC CAGCCTCACC GTGCTCGTCC TCACCGTGCT GTTCGCGTTC
CTCGGCCCCC TCCTGTGGCC GTGGGACCAC ACCGTGCACC GGGAAATCCT GCCCAACCAG
CCACCCAGCT GGGCCCACCC CTTCGGCACC ACCAACGCCG GACACGACGT GCTCGGCCAG
CTCATGCGCG GCACCCAGCA GACCCTCAAA GTCGCGCTCA CCGTCTCCGT GCTGGCCACC
GCCTTCGGTG CGCTGTGGGG CGCGGTCGCC GGCTACTACC GGGGCTGGAT CGACGCGGTG
ATGATGCGTA TCGTCGACGT GCTCATGGTG GTCCCCCTCC TCGTCGCTGT CGCCGCCATC
AGCGGCAACG TGCGCGGCGG CACCACCTGG TGGGCGGTCG CGCTCATCAT CGCGCTGTTC
TCGTGGACCA CGATCGCACG CGTCGTCCGC GGCGTAGTGC TCTCCCTGCG GGAACAGGAG
TTCGTGGAAG CGGCCCGCGC TGCCGGCGCC TCTGACGCCC GCATCGTCCT CCACCACCTG
CTCCCCAACG CGGCCGGTCC CACGATCGTC GCCGCCACCC TCCTCATTGC CACGTCGATC
CTGCTCGAAG CGAGCATGTC CTTCCTCGGT TTCGGCATCC AGGCACCCGA CATCTCCCTC
GGCCTGATGA TCGACAACGC GCGCACCGCC GCCTTCACCC GGCCGTGGCT CTTCTACCCG
CCGGGCTTGT TCATCGTGAT GATCTGCCTG ACGATTAACT TCATCGGTGA CGGCCTGCGC
GACGCCCTCG ACCCTCGACA AACCATCACA CGCCGATGA
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| Protein sequence | MSDLHPPAST PAPSASAASP DPVDRSAEHG QLRMVATRFL RHRMAMASLT VLVLTVLFAF
LGPLLWPWDH TVHREILPNQ PPSWAHPFGT TNAGHDVLGQ LMRGTQQTLK VALTVSVLAT
AFGALWGAVA GYYRGWIDAV MMRIVDVLMV VPLLVAVAAI SGNVRGGTTW WAVALIIALF
SWTTIARVVR GVVLSLREQE FVEAARAAGA SDARIVLHHL LPNAAGPTIV AATLLIATSI
LLEASMSFLG FGIQAPDISL GLMIDNARTA AFTRPWLFYP PGLFIVMICL TINFIGDGLR
DALDPRQTIT RR
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