| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1627 |
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| Symbol | |
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| ID | 3580405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1887518 |
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| End bp | 1890514 |
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| Gene Length | 2997 bp |
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| Protein Length | 998 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637685321 |
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| Product | cellulose 1,4-beta-cellobiosidase |
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| Protein accession | YP_289685 |
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| Protein GI | 72162028 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.234171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGCGC TCCCATGGTG GGCCTCCGCT GTGAGGTCAT CCTCCCAGTT CGAATCCCCC
TACGGAAGGA CTTCCGTGCT TAGGAGACCC AGATCTCGAT CCCCCCTTGT CGCCCTCACC
GCGGCGACTT GCGCAGTCGC GCTCGGGGGT ACGGCGGTTC CCGCCCAGGC AGACGAAGTC
AACCAGATTC GCAACGGCGA CTTCAGCTCC GGCACCGCAC CCTGGTGGGG AACCGAGAAC
ATCCAACTCA ACGTCACCGA CGGGATGCTG TGCGTCGACG TCCCCGGCGG CACCGTCAAC
CCGTGGGACG TGATCATCGG CCAGGACGAC ATCCCCCTCA TCGAAGGTGA GTCCTACGCC
TTCTCCTTCA CTGCCTCCAG CACCGTCCCC GTCTCCATCC GCGCCCTGGT GCAAGAGCCC
GTGGAGCCGT GGACCACCCA GATGGACGAG CGTGCCCTGC TCGGCCCCGA GGCAGAAACC
TACGAATTCG TCTTCACCTC CAACGTCGAC TGGGACGACG CCCAAGTCGC CTTCCAGATC
GGCGGCTCCG ACGAACCGTG GACCTTCTGC CTCGACGACG TCGCCCTGCT CGGCGGCGCC
GAACCCCCGG TCTACGAACC CGACACCGGA CCGCGGGTCC GCGTCAACCA GGTCGGCTAC
CTCCCGCACG GTCCCAAGAA GGCGACCGTG GTCACCGACG CCACCAGCGC GCTCACCTGG
GAGCTTGCCG ACGCCGACGG TAACGTGGTC GCCAGCGGCC AGACCAAGCC GCACGGCGCG
GACTCCAGCT CCGGGCTCAA CGTCCACACC GTCGACTTCA GCTCCTACAC CACGAAGGGA
AGCGACTACA CGCTCACCGT CGACGGTGAA ACCAGCTACC CCTTCGACAT CGACGAAAGC
GTCTACGAGG AACTGCGCGT CGACGCGCTG TCGTTCTACT ACCCGCAGCG CAGCGGCATC
GAGATCCTCG ACTCCATCGC CCCCGGCTAC GGACGCCCGG CCGGCCACAT CGGCGTGCCC
CCCAACCAGG GCGATACCGA CGTGCCGTGC GCGCCCGGCA CCTGCGACTA CTCCCTGGAC
GTCTCCGGCG GCTGGTACGA CGCGGGCGAC CACGGCAAAT ACGTGGTCAA CGGCGGTATC
TCGGTGCACC AGATCATGAG CATCTACGAG CGCTCCCAGC TCGCCGACAC CGCCCAGCCC
GACAAGCTGG CCGACTCCAC CCTGCGCCTG CCCGAAACCG GCAACGGCGT GCCCGACGTG
CTCGACGAAG CACGCTGGGA GATGGAGTTC CTCCTCAAGA TGCAGGTGCC CGAAGGCGAA
CCGCTCGCCG GCATGGCGCA CCACAAGATC CACGACGAAC AGTGGACCGG GCTGCCGCTG
CTGCCCTCCG CTGACCCGCA GCCGCGCTAC CTGCAGCCGC CGTCCACCGC GGCCACGCTG
AACCTGGCCG CCACCGCCGC CCAGTGCGCT CGCGTGTTCG AACCCTTCGA CGAGGATTTC
GCCGCCGAGT GCCTGGCTGC CGCGGAAACC GCGTGGGACG CCGCCAAGGC CAACCCGAAC
ATCTACGCGC CTGCCTTCGG TGAAGGCGGC GGCCCGTACA ACGACAACAA CGTCACCGAC
GAGTTCTACT GGGCCGCGGC CGAACTGTTC CTCACCACCG GCAAGGAGGA GTACCGCGAC
GCGGTGACCT CGTCGCCGCT GCACACCGAC GACGAAGAGG TCTTCCGCGA CGGCGCCTTC
GACTGGGGAT GGACTGCTGC GCTGGCCCGC CTCCAGCTGG CCACGATCCC CAACGACCTC
GCCGACCGCG ACCGGGTGCG CCAGTCCGTG GTCGATGCCG CCGACATGTA CCTCGCCAAC
GTCGAGACCA GCCCGTGGGG CCTGGCCTAC AAGCCGAACA ACGGCGTGTT CGTCTGGGGC
TCCAACAGCG CTGTCCTCAA CAACATGGTG ATCCTGGCGG TCGCCTTCGA CCTCACCGGT
GACACCAAAT ACCGCGACGG CGTGCTGGAA GGCATGGACT ACATCTTCGG CCGCAACGCG
CTGAACCAGT CCTACGTCAC CGGCTACGGC GACAAGGACT CCCGCAACCA GCACAGCCGC
TGGTACGCCC ACCAGCTCGA CCCCCGGTTG CCCAACCCGC CCAAGGGCAC GCTGGCCGGT
GGACCCAACT CCGACTCCAC CACCTGGGAC CCGGTGGCCC AGTCCAAGCT GACCGGGTGC
GCCCCCCAGA TGTGCTACAT CGACCACATC GAGTCGTGGT CCACCAACGA GCTGACCATC
AACTGGAACG CCCCCCTGTC GTGGATCGCG TCCTTCATCG CCGACCAGGA CGACGCCGGC
GAGCCCGGCG GAGAAGAGCC CGGACCGGGC GACGACGAGA CCCCGCCGAG CAAGCCTGGG
AACCTGAAGG CCAGCGACAT CACCGCGACC AGCGCCACCC TGACCTGGGA CGCCTCCACC
GACAACGTCG GAGTGGTCGG CTACAAGGTC TCCCTGGTCC GCGACGGTGA CGCTGAAGAG
GTGGGCACCA CCGCGCAGAC CAGCTACACG CTCACCGGGC TGAGCGCGGA CCAGGAGTAC
ACCGTCCAGG TGGTCGCCTA CGACGCGGCA GGCAACCTCT CCACGCCAGC CACCGTCACC
TTCACCACCG AGAAGGAGGA CGAGACTCCC ACGCCCAGCG CCTCCTGCGC GGTGACGTAC
CAGACCAACG ACTGGCCGGG CGGCTTCACC GCCTCGGTGA CGCTGACCAA CACCGGCAGC
ACCCCGTGGG ACTCCTGGGA ACTGCGCTTC ACCTTCCCGT CGGGACAGAC TGTCAGCCAC
GGCTGGAGCG CCAACTGGCA GCAGAGCGGC AGTGACGTGA CCGCCACCTC CTTGCCGTGG
AACGGATCAG TTCCGCCGGG CGGCTCAGTC AACATCGGCT TCAACGGAAC CTGGGGCGGT
TCGAACACCA AACCTGAGAA GTTCACCGTC AACGGCGCGG TCTGCTCCAT CGGCTGA
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| Protein sequence | MGALPWWASA VRSSSQFESP YGRTSVLRRP RSRSPLVALT AATCAVALGG TAVPAQADEV
NQIRNGDFSS GTAPWWGTEN IQLNVTDGML CVDVPGGTVN PWDVIIGQDD IPLIEGESYA
FSFTASSTVP VSIRALVQEP VEPWTTQMDE RALLGPEAET YEFVFTSNVD WDDAQVAFQI
GGSDEPWTFC LDDVALLGGA EPPVYEPDTG PRVRVNQVGY LPHGPKKATV VTDATSALTW
ELADADGNVV ASGQTKPHGA DSSSGLNVHT VDFSSYTTKG SDYTLTVDGE TSYPFDIDES
VYEELRVDAL SFYYPQRSGI EILDSIAPGY GRPAGHIGVP PNQGDTDVPC APGTCDYSLD
VSGGWYDAGD HGKYVVNGGI SVHQIMSIYE RSQLADTAQP DKLADSTLRL PETGNGVPDV
LDEARWEMEF LLKMQVPEGE PLAGMAHHKI HDEQWTGLPL LPSADPQPRY LQPPSTAATL
NLAATAAQCA RVFEPFDEDF AAECLAAAET AWDAAKANPN IYAPAFGEGG GPYNDNNVTD
EFYWAAAELF LTTGKEEYRD AVTSSPLHTD DEEVFRDGAF DWGWTAALAR LQLATIPNDL
ADRDRVRQSV VDAADMYLAN VETSPWGLAY KPNNGVFVWG SNSAVLNNMV ILAVAFDLTG
DTKYRDGVLE GMDYIFGRNA LNQSYVTGYG DKDSRNQHSR WYAHQLDPRL PNPPKGTLAG
GPNSDSTTWD PVAQSKLTGC APQMCYIDHI ESWSTNELTI NWNAPLSWIA SFIADQDDAG
EPGGEEPGPG DDETPPSKPG NLKASDITAT SATLTWDAST DNVGVVGYKV SLVRDGDAEE
VGTTAQTSYT LTGLSADQEY TVQVVAYDAA GNLSTPATVT FTTEKEDETP TPSASCAVTY
QTNDWPGGFT ASVTLTNTGS TPWDSWELRF TFPSGQTVSH GWSANWQQSG SDVTATSLPW
NGSVPPGGSV NIGFNGTWGG SNTKPEKFTV NGAVCSIG
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