Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1626 |
Symbol | |
ID | 3580404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 1886655 |
End bp | 1887380 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637685320 |
Product | GntR family transcriptional regulator |
Protein accession | YP_289684 |
Protein GI | 72162027 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.60188 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCTCCG AGAGCCCCGT GCGCGCGGCC CCCCGTGCCG GACGGATGAC GGTGACCCGC CGAGCAGTCG AACAGATCAA GGCGATGATC GCCGACGGAA CACTCCACCC CGGCCAGCGG CTCCCCACCG AGCGGGAACT CGCCGCGAAA ATGGGACTCT CCCGCAGCTC CATGCGGGAA GCGATCCGGG TCCTGACCAC CCTGGGGGTA CTGGAAGCGC GGCACGGCGC AGGCGTCTAC GTCACCGAAC TCCACCCCCG CAGACTGCTC GAACCCTTCT CCGTCCTCGC CGAGGTCGGC CGCGGCACCA CCCTGCTGGA AATGCTCCAC GTGCGCCGCA TCGTGGAACC GGCCGCCGCA GCACTCGCTG CGGTCCGCGC CAGCGACACA CACCTGAGCA CCCTGGCCGC CCTCCTGGAC GCAGAAGACC ACGCCTGCGG CCTGGCCGCG ACCGAGGCAG GCACCGCCTT CCACCGCACC CTCGCCGAAC TCGCGGGAAA CGCGACCCTG GCGGCACTCA TCGACGGGCT GGCCTCACCC GCGCTGGGAG CGCGGATCCA CCGCGACCCG GCAGCCGACG AGGAAGAATG GGCGGCACAG CTCCGCGGCG ACCACCACAT CATCTACCGC GCCCTGCAGA ACCGGGACCC GGAGGCAGCG CAGGCCGCAA CCACCCTCCA TCTCCTCCGC CTGGAAGAGC GGTTCCGCGA CCGCATCGCC GTCTAA
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Protein sequence | MTSESPVRAA PRAGRMTVTR RAVEQIKAMI ADGTLHPGQR LPTERELAAK MGLSRSSMRE AIRVLTTLGV LEARHGAGVY VTELHPRRLL EPFSVLAEVG RGTTLLEMLH VRRIVEPAAA ALAAVRASDT HLSTLAALLD AEDHACGLAA TEAGTAFHRT LAELAGNATL AALIDGLASP ALGARIHRDP AADEEEWAAQ LRGDHHIIYR ALQNRDPEAA QAATTLHLLR LEERFRDRIA V
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