Gene Tfu_1615 details

Gene Information

• Locus tag: Tfu_1615
• ID: 3581102
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 1871657
• End bp: 1873648
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637685309
• Product: beta-galactosidase
• Protein accession: YP_289673
• Protein GI: 72162016
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1874] Beta-galactosidase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.0289359
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGAGTC CAGCGTCTCT GTGGTTCGGC GGCGACTACA ACCCTGACCA GTGGCCGGAA 
CCGGTCTGGG ACGAGGACAT GCGGCTCATG CGGCAGGCCG GAGTCACCCT GGCCACGGTC 
GGCGTGTTCT CCTGGAGCCT GCTGGAACCC GAAGAAGACC GCTACACCTT CGACTGGCTG 
GACCGGGTCC TGGACCTGCT GCACGCCAAC GGGATCAGTG CCTGCCTCGC CACCCCGACC 
GCGTCCCCGC CCCCGTGGTT CACCCTCGCC CACCCCGACG CTCTGCCGGT GACTGCCGAC 
GGGGTGCGGC TGACCCACGG CAGCCGCGAC ACCTACGACG TGTGCGCCCC CGCCTACCGG 
GAGGCGTCTT TACGCATCAC CCGGGCGCTC GCGGAACGCT ATGCCCACCA CCCCGCGCTG 
GCGCTGTGGC ATGTGCACAA CGAGTACGGC ACCCACACCT ACGGGGAGCA CGCTGCCCGC 
GCCTTCCGCA CCTGGCTGCG TGGCCGCTAC GGCAGCCTGG CCACGCTCAA CGACGCGTGG 
ACCACGGCGT TTTGGGGGCA GCGCTATTCG GACTGGGAGC AGATCCACCC GCCGCGCGCC 
ACCCAGTACC TGCCCAACCC GGCACACCTG TTGGACTTCC GCCGTTTCCT CTCCGACGCC 
ATGCGCGGCC ACTACTGCGC CCAGCGCGAC ATCCTGCGGG CCGCCAACCC GGATGTCCCC 
GTCACCACCA ACTTCGCGTT CGGCTCCTGG GTTCCGGTCG ACCCGTGGCG GTGGGCTGCC 
GACCTGGATC TCGTAGCGGT TGACGTCTAC CCGGACGCCA CCGGGGAGGC TGCGGCCCAC 
CAGCACGCGT TCGCCGCTGA CCTGGCCCGC TCCTGGGGAA GGGGCCGGCC GTGGCTGCTC 
ATGGAGCAGG CCACCGGCTA TCTCGGGGCT CGGGTGCGGC CCAAAGCTCC CGGGGAGATC 
ATCCGGCACA GTCTGAGCCA CGTGGCCCGC GGCTCCCGGG GGGCGATGTT CTTCCAATGG 
CGGGCCTCCG TGGGCGGAGC CGAACAGTGG CATCCCGCGA TGTTGCCGCA CACCGGCGCG 
GACTCCCCCG TCTTTGCGGA AGTGTGTGAG CTGGGAGCAC TGTTGGGCCG CCTTGCGGAA 
GTCCAGGACA CCCGGGTTGT GGAGGACGCG GCCGTGGTGT GGGATCCCGA GTCCTGGTGG 
GCGCTGCAGT CGCCGTCACT CCCCTCCCCC GACCTGGACT ATCTCGCCGC AGTCCGGCAA 
GTGCACCGGG TGCTGTGGCG GCAGGGACGC ACGGTCGCGT TCGTCTCCCC CCACTCCCCT 
ATGCCGGATC TTCCCCTGCT CGTCGTGCCG CTGCTGTACT TGACCTCCGC GGCGACTGCG 
CGTTTCCTCG CCGACTATGC GGAGCAAGGC GGCATTCTCG TGGTCACCTA CGGCAGTGGG 
ACCGCAGACG AGCATGCGCG GGTGTGGCCT GGAGGCTACC CGGGGGCGCT CCGCGACCTG 
CTGGGAGTGC GTGCTCTGCA GCACTATCCG CTCGATCCGG CGGTCGACGC GGTCACGGTG 
TGCGGGGAGG ACGGTGAATA CTGGGGGCGG GCGCGCCGGT GGAGTGAAGA GCTCGACGTG 
GCCGACGCTA AGGTGGTAGC ACGCTATGCG GACGGCCCGT TCGCGGGGCG TGCCGCGGTC 
ACGCGGGTGG GGCGCGGCGC GGGACAGGCG TGGTACGTCT CCTGCGATCT GGAGGACGCT 
GGGTTGGGGA AGGTCCTGTC CCGCGCCGGC CTGTCCGGGG GCACCGCTAC TCCCCCCGCG 
GTGGAAGTGG TACACCGGGA TTCCCGGGAC GAGCAGTGGG TGTTCGTGCT CAACCACGGC 
AACGGCCCGG TGACAGGCGC CGACCTGGGG CTGGCTGTGG AGAGCCGCGA GGTGCTCTCC 
GGGGTTTCTG GAGCGGCGCT GGTCGTCCCC GCGGGAGGAG TGGCGGTGCT GCGGGGGCCG 
CGTCGGCCGT GA 

 

Protein sequence

MPSPASLWFG GDYNPDQWPE PVWDEDMRLM RQAGVTLATV GVFSWSLLEP EEDRYTFDWL 
DRVLDLLHAN GISACLATPT ASPPPWFTLA HPDALPVTAD GVRLTHGSRD TYDVCAPAYR 
EASLRITRAL AERYAHHPAL ALWHVHNEYG THTYGEHAAR AFRTWLRGRY GSLATLNDAW 
TTAFWGQRYS DWEQIHPPRA TQYLPNPAHL LDFRRFLSDA MRGHYCAQRD ILRAANPDVP 
VTTNFAFGSW VPVDPWRWAA DLDLVAVDVY PDATGEAAAH QHAFAADLAR SWGRGRPWLL 
MEQATGYLGA RVRPKAPGEI IRHSLSHVAR GSRGAMFFQW RASVGGAEQW HPAMLPHTGA 
DSPVFAEVCE LGALLGRLAE VQDTRVVEDA AVVWDPESWW ALQSPSLPSP DLDYLAAVRQ 
VHRVLWRQGR TVAFVSPHSP MPDLPLLVVP LLYLTSAATA RFLADYAEQG GILVVTYGSG 
TADEHARVWP GGYPGALRDL LGVRALQHYP LDPAVDAVTV CGEDGEYWGR ARRWSEELDV 
ADAKVVARYA DGPFAGRAAV TRVGRGAGQA WYVSCDLEDA GLGKVLSRAG LSGGTATPPA 
VEVVHRDSRD EQWVFVLNHG NGPVTGADLG LAVESREVLS GVSGAALVVP AGGVAVLRGP 
RRP