| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1608 |
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| Symbol | |
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| ID | 3581095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1858297 |
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| End bp | 1859547 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637685302 |
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| Product | putative xylose repressor |
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| Protein accession | YP_289666 |
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| Protein GI | 72162009 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000726705 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCGGCA GGACCAGAGA CCCCAACAAA GCAGAAGTGG GCGACGTCCG CGCCACCAAC
CTCGCAGTGG TGCTCCGCTG CGTCCGCGAG CAGGGCCCCT GCTCCCGCGC CGACATCGCC
GCCGCCACCG GACTCAACAA AACCACCGTC TCCAGCCTCG TCTCCGAACT CCTGCGCCGC
CGCCTCCTCC GAGAAACCGG CACCACCGAA AACCGTGTCG GCCGCCCCGC CATCATGCTC
GCCCTCGACG GTGCCTCCAG CGCCGCCATC GGCATCGAAG TCAACGCCGA CTACCTCACC
GCCGTCGCCG TCGACCTCGC CGGCCGCCCC GTCCTCTCCT GGCGGCGCGC CTTCCCCGGC
AACACCGTCT CACCCGCCCG CACCGTCACC GCCGTCACCG CACTCATCCG CCGCGTCGTC
ACCCGCATCG AACACGACGG CCGCCAAGTC CTCGGCCTCG GCGTCGCCCT CCCCGGACTC
GTCGACCCCG ACGGCCGAGC CCGCCTCGTC CCCTCCCTCA ACTGGCGTAA CGTCGACTTC
GCCGCCGAAC TCGTCGACGC ACTCCGCGGC CCCGGATTCC CCGTCGAAAT CGGCAACGAC
GCCAACTACG CCGTCCTCGC CGAACACCGC TTCGGAGAAC ACGCCGGCAC CCGCGACCTC
GTCTACCTCA CCGGCGGCAC CAGCCTCGGC GCCGGACTCC TCGTCGACGG CTCCCTCCGC
CGCGGCCACT CCGGCTACAG CGGCGAAGCC GGACACATCC CCGTCCCCGC CCCCGGCGGA
ACCGCACCCC TCGAAACCGT CGCCTCCATC ACCGCCATCG CCCGCCGCGT CCTCCCCGAC
GACACCCGCG ACGACGAACA CCTCTCCCTC GCCGAAATCG AACTCCGCAT CGACGAAATC
GTCGCCCGCG CTCGCGCCGG AGACCCCACC ACCCTCACCC GCCTCCACGA CGCAGCCAAA
GACCTCGCCA CCGGAATCTT CACCCTCGTC AGCGTCCTCG ACCCCGCCCG CGTCATCCTC
GGCGGCTACT ACGCCGAACT CGCCCCCTGG CTGCTCCCCG TCGTCAACGA CCTCCTCGAC
ACCCGCGGCA TCCCCGCCGA CGAACCCATC GCGGTGGCCT CCACCCTCAG CCTGGACGCC
CCCGCCCTCG GTGCCGCAGC CCGAGTCCTC GACGCAGTCG AACAAGGACG CCTCCCCGAC
AACACCACCC CCGCTCGCGC CCTTGCCGCC GCCGCCCGAG CACCCCGATA A
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| Protein sequence | MIGRTRDPNK AEVGDVRATN LAVVLRCVRE QGPCSRADIA AATGLNKTTV SSLVSELLRR
RLLRETGTTE NRVGRPAIML ALDGASSAAI GIEVNADYLT AVAVDLAGRP VLSWRRAFPG
NTVSPARTVT AVTALIRRVV TRIEHDGRQV LGLGVALPGL VDPDGRARLV PSLNWRNVDF
AAELVDALRG PGFPVEIGND ANYAVLAEHR FGEHAGTRDL VYLTGGTSLG AGLLVDGSLR
RGHSGYSGEA GHIPVPAPGG TAPLETVASI TAIARRVLPD DTRDDEHLSL AEIELRIDEI
VARARAGDPT TLTRLHDAAK DLATGIFTLV SVLDPARVIL GGYYAELAPW LLPVVNDLLD
TRGIPADEPI AVASTLSLDA PALGAAARVL DAVEQGRLPD NTTPARALAA AARAPR
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