Gene Tfu_1605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1605 
Symbol 
ID3581092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp1853339 
End bp1854592 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content66% 
IMG OID637685299 
Productputative xylose repressor 
Protein accessionYP_289663 
Protein GI72162006 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGGGCG CTACCGAGGG ACCGGCTGGT TTCCAGGCGG TAAGGGAGAC CAACTTGGGG 
ATCGTGCTGC GCACGATCCG GACGAGTGCT CCCTGTTCCC GGGCGGTGGT TGCCGCGTCG
ACAGGGTTGA CGAAGGCTAC TGTGTCCAGC TTGGTGGCTG AGTTGATCGA CCGGGGTCTG
GTGTGTGAGA CCGGGTTGGT CAACGAGCGT CGGGTGGGGC GTCCCGGCAT GATGTTGACG
ATCAACGGGT CGACCCTGGT GGCTCTCGGG CTTGAGGTCA ACGTCGACTA TCTCGCGTTG
GCGGCGTTGG ACCTGTTGGA GCGCGAGGTG CTGACGCGGC ATGTGGCTTT CGACGCTCGG
GCTGCCGGTC CTGAGGAGTG CGCGAAGCAG CTCAAGACGC TGCTGTTGGA GACGGTTGCG
GACCCTTTGC TACGGGATCG TCCCCTGCTG GGGGTGAGTG TGGCGATTCC CGCGCTCGTC
GATGTGAGTT CGGGGACGGT CACGAATGCT CCGAACTTGG GGTGGCGGAA TTTCCCGTTG
CAGCAGCGGC TCACTGAGCT GCTGGCGGAT ACTCCGCTGG CGGGGGCGCC GGTGCGGGTC
GACAACGACG CCAATCTGGG TGCGGTCGCC GAGTACCGGG GCGGGCATCT GGCGCGCACC
ATGGACTTGG TGTATTTGAC GGGTGAGGTC GGTATCGGCG CGGGTGTGCT GATGAACGGT
GAACCGTTGC GCGGGGCGAG CGGGTTCGCC GGGGAGGTCG GGCATATTCC GCTGCTCAAG
GACGGGCCGG CATGTGCGTG CGGGCAGGAC GGCTGCTTGG AGGCGTTGGC GGGGTTGGAT
TCGATCCTGC GCCGCGCGGT CCCTGACCTG GTTCCGGAGG GGCCGGTGCG GGGCAGTGTC
GTGGAGTCCT TGGTTGCGGA GACGGTGCGC CGCGCGGAGT CAGGGGATGC GACGGCGGTG
CAGGCGTTGG AGGATGCCGG GGAGTGGCTG GGGCGTGCCG CAGCGACTCT GGTGAACTTG
TTGAATCCCA GCGCGATTAT TCTCGGCGGG TATTTTGTGC CGCTGTCGCC GTGGCTGTTG
CCGTCGTGCC GGGAGGCGAT GGCTGCGTAT TCTTTCGCGC CGAACAGTGG GAACTGCCGG
ATTGAGCCGT CCACGTTGGG GTTGAGTGCG GCGGCCCGCG GCGGCGCTAT GGCGTTGATC
GATGCGTTGG ATACCGGGTT GTTGCCGTTG CCGCCGGGCA GTAGTGCGGC CTGA
 
Protein sequence
MVGATEGPAG FQAVRETNLG IVLRTIRTSA PCSRAVVAAS TGLTKATVSS LVAELIDRGL 
VCETGLVNER RVGRPGMMLT INGSTLVALG LEVNVDYLAL AALDLLEREV LTRHVAFDAR
AAGPEECAKQ LKTLLLETVA DPLLRDRPLL GVSVAIPALV DVSSGTVTNA PNLGWRNFPL
QQRLTELLAD TPLAGAPVRV DNDANLGAVA EYRGGHLART MDLVYLTGEV GIGAGVLMNG
EPLRGASGFA GEVGHIPLLK DGPACACGQD GCLEALAGLD SILRRAVPDL VPEGPVRGSV
VESLVAETVR RAESGDATAV QALEDAGEWL GRAAATLVNL LNPSAIILGG YFVPLSPWLL
PSCREAMAAY SFAPNSGNCR IEPSTLGLSA AARGGAMALI DALDTGLLPL PPGSSAA