| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1603 |
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| Symbol | |
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| ID | 3581090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1850605 |
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| End bp | 1851762 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637685297 |
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| Product | xylose isomerase |
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| Protein accession | YP_289661 |
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| Protein GI | 72162004 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2115] Xylose isomerase |
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| TIGRFAM ID | [TIGR02631] xylose isomerase, Arthrobacter type |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACT ACCAGCCCAC ACCCGAGGAC CGGTTCAGCT TCGGACTGTG GACTGTGGGA
TGGCGCGGCC ACAACACCTT CGGCAAGGCC GTACGCCCGC AACTCGACCC CGTCGACGTC
GTCTGGAAAC TCCGCGAACT CGGCGCCTAC GGCATCACCT TCCACGACGA CGACCTCCTC
CCGCCGGACA GCACCCCCGC GGAACGCGAC GCCATCATCA AACGCTTCAC CCGGGCGCTC
GAAGAGAGCG GCATGACCGT CCCCATGGTC ACTACCGACC TCTTCAGCCA CCCCGTCTTC
CGCGACGGCG GCTTCACCTC CAACAGCCGC GACGTGCGCC GCTACGCCCT GCGCAAGGTC
ATGCGCAACA TCGACCGCGC CGCGGAACTC GGCGCCCGCA CCTACGTGTG CTGGGGCGGC
ATGGACGGCG CCGAATACGA ACCCGCCAAG AACATCTCCG CCGCGCTCGA CCGCCTGCGC
GAAGCCTTCA ACATCCTGTG CGAATACGTC CGCAGCAAGG GCTACAACCT GCGGTTCGCC
CTCGAACCCA AACCCAACGA GCCCCGCGGC GACATCCTCC TGCCCACCAT CGGCCACGCC
ATCGCCTTCA TCAACGAGCT CGACCACCCC GAAATGGTCG GCCTCAACCC CGAAGTCGGC
CACGAACAGA TGGCCGGACT CAACTTCACC CACGGCATCG CCCAAGCCCT CTGGCACGGC
AAACTGTTCC ACATCGACCT CAACGGCCAG CGCGGCATCA AATACGACCA GGACCTGCGC
TTCGGCGCCG GCGACGTGCG CGACGCGTTC TTCCTCGTCA ACCTGCTGGA AAGCAGTGGC
TACGACGGAC CGCGCCACTT CGACTTCAAG ACCCCGCGCA CCGAAGACGT CGACGGCGTG
TGGGAAGCGG CACGCAACTG CATGCGCAAC TACCTCATCT TCAAGGAGAA GGCTGAAGCG
TTCCGCGCCG ACCCCGAAGT CCGCGAAGCC ATGGAAGCCG CCCGGGTCTT CGAACTGGAG
CAGTCCACCC TCGCCGAAGG GGAGACCCTG GACGACCTGC TCGCCGAAGA CATCAACCTG
GACGAAGTGG CCCAGCGCGG CTACCACTTC GAACGCCTCG ACCAGCTCGC CCTCGACTAC
CTCCTGGGCG TGCGCTAA
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| Protein sequence | MSNYQPTPED RFSFGLWTVG WRGHNTFGKA VRPQLDPVDV VWKLRELGAY GITFHDDDLL
PPDSTPAERD AIIKRFTRAL EESGMTVPMV TTDLFSHPVF RDGGFTSNSR DVRRYALRKV
MRNIDRAAEL GARTYVCWGG MDGAEYEPAK NISAALDRLR EAFNILCEYV RSKGYNLRFA
LEPKPNEPRG DILLPTIGHA IAFINELDHP EMVGLNPEVG HEQMAGLNFT HGIAQALWHG
KLFHIDLNGQ RGIKYDQDLR FGAGDVRDAF FLVNLLESSG YDGPRHFDFK TPRTEDVDGV
WEAARNCMRN YLIFKEKAEA FRADPEVREA MEAARVFELE QSTLAEGETL DDLLAEDINL
DEVAQRGYHF ERLDQLALDY LLGVR
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