| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1598 |
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| Symbol | |
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| ID | 3581641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1841234 |
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| End bp | 1842427 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637685292 |
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| Product | CRISPR-associated Cse4 family protein |
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| Protein accession | YP_289656 |
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| Protein GI | 72161999 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01869] CRISPR system CASCADE complex protein CasC/Cse4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00285454 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGCA CCATTCTCGA CCTGCACATC CTGCAGACCG TCCCGCCCAG CAACCTCAAC
CGGGACGACA CCGGCGCCCC CAAGACCGCC AACTACGGCG GGGTGCGCCG CGCCCGCGTG
TCCAGCCAGG CGTGGAAACG CGCCACCCGC ATGGCCTTCA ACACCCTGCT CCCCCCGGAA
GACCTCGGTG TGCGCACCAA GCGGGTCGCT GAAGTGCTGG CCGAACGGAT CCGCCGCCAC
GACGATTCCA TCGACGAGCA GAACGCCTGG ACCCTGGCCG CGGAAACCAT TCAGGCCGCC
ACCGGTAGCA AGATCGAAGT GCCCAAGCGC AAAGCCGACA CAGCAAAGAA GGAAGGCAAA
GCCGCTCCGG CCCCCGAATC CTCCTACCTG ATGTTCCTCA GCAACCGCCA GCTCGACGGC
CTGGCTGAAC TCGCTCTCGA AGGCCGCGCC GACATCAAGG CGTTTTTCAA GGACAAAGAC
AACAAAAAGC GGGCTAAAGA GATCGCCGAC ACCCGCCACT CCGTCGACAT CGCCCTGTTC
GGACGCATGG TCGCCGACGG CGCTGACATC AACGTCGACG CCGCCGCCCA AGTCGCCCAC
GCGATCAGCG TGCACGCGGT AGAGAACGAA TTCGACTACT ACACCGCTGT CGACGACCGC
AACCCCGACA GTGAAACTGG CGCGGGCATG ATCGGCACCA TCGAATTCAA CGCCGCCACC
CTCTACCGCT ACGCTGCCCT CGACGTCGAT CTGCTGCGCA AGAACCTCGG CGAAGGGCTT
CGGGAAGACG AGCCTCTCAC CGAACCGCTA CGCCGTGCCG TTGAAGCGTT CATCCGCGGC
TTCGTCGAAT CCATGCCCAC CGGCAAGATC AACACCTTCG GCAACCACAC CCTCCCCGAC
GTGGTGATCG CTAAAATCCG CACCTCCCGC CCGGTGAGCT TCGCTAGCGC TTTCGAAGAA
CCCGTCACCG CCACAAACGC CGGCGGATAC CTGAAACAGG CTTGCGAACG CCTAGCCACC
TACATCCCCG AGATCGAACA CGCCTACGGA GTCAAAGACG ACACCGACAC ATGGCTGGTC
TGCGTGGGAC CCAACACCAA GGCACTCACC AGTCTTCCCG GCGCACAGGT GACCCTCTCC
GAACTCGTCA CCGCCGTCGG TTCAGCAGTC GCACAGCGGA TGGCAGACCG GTGA
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| Protein sequence | MNRTILDLHI LQTVPPSNLN RDDTGAPKTA NYGGVRRARV SSQAWKRATR MAFNTLLPPE
DLGVRTKRVA EVLAERIRRH DDSIDEQNAW TLAAETIQAA TGSKIEVPKR KADTAKKEGK
AAPAPESSYL MFLSNRQLDG LAELALEGRA DIKAFFKDKD NKKRAKEIAD TRHSVDIALF
GRMVADGADI NVDAAAQVAH AISVHAVENE FDYYTAVDDR NPDSETGAGM IGTIEFNAAT
LYRYAALDVD LLRKNLGEGL REDEPLTEPL RRAVEAFIRG FVESMPTGKI NTFGNHTLPD
VVIAKIRTSR PVSFASAFEE PVTATNAGGY LKQACERLAT YIPEIEHAYG VKDDTDTWLV
CVGPNTKALT SLPGAQVTLS ELVTAVGSAV AQRMADR
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