| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1590 |
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| Symbol | |
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| ID | 3581633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1831823 |
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| End bp | 1832944 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637685285 |
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| Product | CRISPR-associated Cse4 family protein |
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| Protein accession | YP_289649 |
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| Protein GI | 72161992 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01869] CRISPR system CASCADE complex protein CasC/Cse4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.322861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTTCG TTGACATTCA CGCCATCCAG ACCCTGCCCT ACTCCAACAT CAACCGCGAC
GACTTGGGCT CCCCCAAGAC GGTCGTCTAC GGCGGCAAGG AACGCACTCG CGTGTCCAGC
CAGAGCTGGA AGCGCGCCGT CCGCCACGAA GTGGAAGCCC GGCTCGGCGA CAAGGCGGTC
CGCACCCGCC GTATCATCAG CGAGATCGCC AAGCGGCTTC GGGAACGCGG CTGGGACGCT
GACCTCGCTG ACGCCGGAGC ACGCCAAGTC GTGCTGTCTG TCGGTAAGAA GAGCGGCATC
AAACTGGAAA AGGAGAAAGA CAGCGAGGCC CCTGCCACTT CTGTCCTGTT CTACCTCCCG
GTCCCCGCAA TCGACGAACT CGCCGCCATC GCCGATGAGC ACCGGGACGC CGTCGCCAAA
GAAGCAGCCA AGAAGACCCC CAAGGGAATC CTCCCCGCTG ACCGCATCAC CGAAGTACTG
AAGAGCCGCA ACGTCTCAGT CAACTTGTTC GGTCGGATGC TCGCTGAACT GCCCTCCACC
GAGGTCGACG GCGCAGTGCA GTTCGCGCAC GCGTTCACCG TGCACGGCAC CACCGTAGAA
GTCGACTTCT TCACCGCTGT CGACGACATC CCCAAAGAAA ACGACCACGG TAGTGGCCAC
ATGAACGCGG GCCAGTTCAG TGCCGGAACG TTCTACCGCT ACGCCAACGT CAACCTCGAC
CGACTGGTGG AAAACACCGG TGACGCCCAA ACCGCCCGCA CCGCCGTGGC CGAGTTCCTC
CGCGCTTTCC TGAGCACGGT CCCCTCCGGG AAACAGAACG CTACCGCTGC CATGACCCTG
CCCGACCTGG TACACATCGC GGTACGCTTC GACCGACCCA TCTCTTTCGC TCCCGCGTTC
GAAACCGCGC TATACGGCAG CGACGGCTAC ACCCTCCGCG CCTGCCAGGA ACTCAACAAC
TACGCCGAAC GGCTCCGCGA AGTCTGGCCC GACGACGCGA TCCGCGGCTA CGCGACCGTG
GAAAACAAGA CCGACCTCGC CGCGTTGGGG GAGCGGTACG ACTCCTACCC GGCGCTCATC
GACGCCATGG TCGCGGCAGC CTTCGAGGGG GAGCGGGAGT GA
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| Protein sequence | MTFVDIHAIQ TLPYSNINRD DLGSPKTVVY GGKERTRVSS QSWKRAVRHE VEARLGDKAV
RTRRIISEIA KRLRERGWDA DLADAGARQV VLSVGKKSGI KLEKEKDSEA PATSVLFYLP
VPAIDELAAI ADEHRDAVAK EAAKKTPKGI LPADRITEVL KSRNVSVNLF GRMLAELPST
EVDGAVQFAH AFTVHGTTVE VDFFTAVDDI PKENDHGSGH MNAGQFSAGT FYRYANVNLD
RLVENTGDAQ TARTAVAEFL RAFLSTVPSG KQNATAAMTL PDLVHIAVRF DRPISFAPAF
ETALYGSDGY TLRACQELNN YAERLREVWP DDAIRGYATV ENKTDLAALG ERYDSYPALI
DAMVAAAFEG ERE
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