| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1589 |
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| Symbol | |
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| ID | 3581632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1831062 |
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| End bp | 1831826 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637685284 |
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| Product | CRISPR-associated Cas5e family protein |
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| Protein accession | YP_289648 |
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| Protein GI | 72161991 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.417403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGTGGCT TCCTGCTGCG GCTAGCTGGC CCCATGCAAA GCTGGGGCGA ACACAGCATG
TTCGGGGAAC GCGACACCCT GCCTTACCCG AGCCGCTCCG GTCTGATCGG AATGTTCGCT
GCCGCCCAGG GGGTGCGCCG CGGCGACCCT CTGGACCGCT ACAAGGAACT GAAGTTCACC
GTTCGCGTCG ACCGGCCAGG GGTGCGGCTC GTCGACTTCC ACACGATCGG CGGCGGCCTT
CCCAAAGAGC GCACCGTGCC CACCGCTGCA GGTGAACGGC GCGACCCTAA GAAAGCCACC
ATCGTCACCA GCCGTTCCTA CCTGGCCGAC GCCGTGTTCA CCGTCGCTGT CACCGGACCG
GAAGCAGACA CTATCGCCGA CGCGTTAGCC GCCCCCTACT GGCAGCCCTA CCTGGGGCGG
CGCGCGTTCG TTCCTGACCC GCTACTGGTC CTGCGCCGCA GGGTCGCTGA CCCGGTGCGA
GAACTAGTGG AAGCGGTGCC GCTCCCCCAT CGCAGGGTGG AAGAAGACGC TGCAACTGTG
CTTGTGGACT TGATCTATGA AGAGGGCGAA TACCCAGATA CGCGCACTCT GACGGTGCTC
AACGACGTTC CGCTCTCGTT CGACAGCAAG AGCCGCCGCT ACTCCACCCG ACAGATCCGA
GTAGTTCCCA CCGAGGTTCC CGCGACACTC GTGGCCGGTC CCGGCAGGGA CTACCAGAAC
AAGCTTTTCA CATACGTCAA GCAGTGCGCC GAGGAGGCAG CATGA
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| Protein sequence | MSGFLLRLAG PMQSWGEHSM FGERDTLPYP SRSGLIGMFA AAQGVRRGDP LDRYKELKFT
VRVDRPGVRL VDFHTIGGGL PKERTVPTAA GERRDPKKAT IVTSRSYLAD AVFTVAVTGP
EADTIADALA APYWQPYLGR RAFVPDPLLV LRRRVADPVR ELVEAVPLPH RRVEEDAATV
LVDLIYEEGE YPDTRTLTVL NDVPLSFDSK SRRYSTRQIR VVPTEVPATL VAGPGRDYQN
KLFTYVKQCA EEAA
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