| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1582 |
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| Symbol | |
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| ID | 3581625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1823864 |
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| End bp | 1824865 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637685277 |
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| Product | CRISPR-associated RAMP Cmr6 family protein |
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| Protein accession | YP_289641 |
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| Protein GI | 72161984 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1604] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01898] CRISPR-associated RAMP protein, Cmr6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTTC CCCACGGTCG ACGGGGAGCT CAGGACACCT CCTCGCAGGA AGAACCGAAA
GAAATCCTGT GCGTCTCCTA CTCTGGGGCG ATAGGCCGAG TCCTCTGCGG AAGAGTGACC
CAGAAGCCAG ACAGTGCGCA GGATGCCCAC CATTGCAAGA GCGCCTCGCC GAAATACGTC
AAAAAAATCC GCTACGATCA GCGCTCTACG CTCGACGCTT CCGCGAATTC GCTGATCATC
CTGCGACGTT TAGCTATCAG CGACGTCTCT CCCCCCACCG CGGATGCGCG CCGCGAGGAT
CCCGTGCTCG GCTGGGCAAG CGAGTACTGC CTCGGCTACC AGAAGGAGTG GGCACAGGCA
GTTGAGCAAC GCCGCGCGCA CGCTCTAAGC ATTCTCAACG CCCGAAAACG GCACATCTAC
CGGGTGGAAC TGACCGCAGA CTGGCGCTTC GTGACCGGAC TAGGAGAGCA GACCGGAGAC
CACGAATTCG GGCTCAGCCT GCACGGCACC TACGGTTGGC CGCTCATCCC CGCTTCCACA
CTCAAAGGAG CCGCAGCGGC CTGGGCTTCT CGGCAAAAGG TTCCCTCTGA ACTCTACACA
TTGGTCTTCG GGCCCCTGCC CTCCCCTGAA GACGAGGAGG ACCGAGACAA CCCCCGGTGC
GGAGTGCGTT TCTTTGACGC CCTTCCCCTA TCCGATCCCC GTAACCACCG CAAAGGTCTG
CGCGTCCATA GTGATGTGAT CACCCCGCAC CAGCACGCCT ACCACACCGA TCAGTCCGCG
GAACCGTGCG CCCCCGGGGA ACACCATCAG CCTGTGCCGC TGCCTTTCCT CTCCCTCAGC
GGTACTTTCG TCACTCACCT CATCGGGGAG GACCCCGACC TCACCGCCAA GGCAGCTGAC
TGGCTCAAGC AGGCTTGTGA AGAGTACGGA ATCGGTGCAC GCACCACGGC AGGCTACGGC
TACTTCACCG TCAACATCAC CGATCAATGG GACTCCCCGT GA
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| Protein sequence | MTFPHGRRGA QDTSSQEEPK EILCVSYSGA IGRVLCGRVT QKPDSAQDAH HCKSASPKYV
KKIRYDQRST LDASANSLII LRRLAISDVS PPTADARRED PVLGWASEYC LGYQKEWAQA
VEQRRAHALS ILNARKRHIY RVELTADWRF VTGLGEQTGD HEFGLSLHGT YGWPLIPAST
LKGAAAAWAS RQKVPSELYT LVFGPLPSPE DEEDRDNPRC GVRFFDALPL SDPRNHRKGL
RVHSDVITPH QHAYHTDQSA EPCAPGEHHQ PVPLPFLSLS GTFVTHLIGE DPDLTAKAAD
WLKQACEEYG IGARTTAGYG YFTVNITDQW DSP
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