Gene Tfu_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1562 
Symbol 
ID3581926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp1799277 
End bp1799687 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content64% 
IMG OID637685257 
Producthypothetical protein 
Protein accessionYP_289621 
Protein GI72161964 
COG category[S] Function unknown 
COG ID[COG3189] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0325114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCAGTA GGCATCCCAT GGATGCCACA CAGGTTGACA TTGAGGTGCG TCGCGTTTAC 
GACGCGGAGG TTCGGGACGG TTCAGCCACC CGTGGGCGGC GGGTGTTTCT CGTGGACCGG
ATGTGGCCGA GAGGGATTCG GAAAAACGAG GTGCACGTGG ACGGGTGGCT CAGGCAGGTG
GCGCCAAGCA GTGAGCTGCG TCGCTGGTTC GGTCACCTTC CCGAGCGGTG GGAGGAGTTT
CAGGACCGCT ACCGGGATGA GCTGGCGCGC GACCCTGAAG GGATTGATGT GCTGGTGGAT
GCTGCACGGC ACGCCCCGGT CACGCTGCTG TATTCCGCTG CTGACACGGA GCGGAACAAT
GCCGTGGTGC TCCGCTCCTA TGTGGTAGAG CAGCTTGGAG CCCGCGACTA A
 
Protein sequence
MGSRHPMDAT QVDIEVRRVY DAEVRDGSAT RGRRVFLVDR MWPRGIRKNE VHVDGWLRQV 
APSSELRRWF GHLPERWEEF QDRYRDELAR DPEGIDVLVD AARHAPVTLL YSAADTERNN
AVVLRSYVVE QLGARD