| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1560 |
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| Symbol | |
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| ID | 3579513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1797322 |
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| End bp | 1798530 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637685255 |
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| Product | putative excision nuclease ABC subunit |
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| Protein accession | YP_289619 |
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| Protein GI | 72161962 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.228081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGTCCGC CTAACGCGTT TTCGTTCAAC ATTGCCTCCG TGCACGGCGG TGGCGCGCTC
ACCGTGGACC GGGGCCCGGA GCAGAAAACC GTGCGGCGGA CTTTTTCGCT CGCGGGAGGC
ATGTGTCCCC GGTGCGAAGG CAGGGGGCAG GTGACGGACA TTGACGTGAC CCAGTTGTAT
GACCCTGATA AGTCGGTCAA CGAAGGTGCG ATCACTGTTC CCGGCTACAA GCCCACCAGT
TGGCCGGTGC AGATCATCGT TGCGTCAGGG TTGATCGACC CGGACAAGCC GATCCGTGAC
TACACCGACA CCGAGCTGCA CAATTTCTTG TACCGGGAGG CCACCAAGGT CCGGATCAGC
AACACGAATC AGACTTATGA GGGCCTGGTG GTGCGGGTGC GCCGGTCGTT TCTGTCGAAG
GACCGTGACG CGTTGCAGCC GCACATTCGG GCTTTTGTGG ACCGGGCAGT AACGTTCCGC
ACCTGTCCTG ACTGTGACGG CACCCGGTTG AATGAGGCGG CTCGATCGTC GAAAATCCGC
GGGATCAGTA TCGCGGACGC GTGCGCGATG CAGATCAGCG ATCTTGCGGA ATGGGTGCGC
AGCCTGGATG AGCCGTCGGT GGCGCCGTTG GTGGCGACGT TGCAGCACAC GTTGGACTCG
TTCGTGGAGA TCGGACTGGG CTATCTGTCG TTGGATCGGC CCTCAGGAAC CCTGTCCGGT
GGTGAGGCGC AGCGGGTGCG GATGGTCCGC CATCTCGGCT CCAGTCTGAC GGATGTCACC
TATGTTTTCG ATGAGCCGAC GATCGGGCTG CACCCGCATG ACATTCAGCG GATGAACGAA
TTGCTGCTGC GGCTGCGCGA CAAAGGCAAC ACGGTGCTGG TGGTGGAGCA CAAGCCTGAG
GTGATCGCCA TTGCCGACCA TGTCATCGAC TTGGGTCCGG GAGCTGGCGC GCAGGGCGGC
ACGGTTTGTT TTGCCGGCAC GGTGGACGGG TTGCGAGCCA GTTCCACGTT GACGGGTCGG
CATTTGGGGG ACCGGGTCGC GTTGAAAGAC ACGGTGCGCA CCCCTGTGGG CAAGTTGGAG
ATCCGGGGCG CTACCACCCA CAACTTGAAG AACGTGGACG TGGACATTCC CCCTCGGGGT
GCTGGTGGTG GTCACCGGGG TGGCTGGTTC GGGCAAGAGT TCGCTGGTGC ACGGGTCGAT
TCCGGCTGA
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| Protein sequence | MGPPNAFSFN IASVHGGGAL TVDRGPEQKT VRRTFSLAGG MCPRCEGRGQ VTDIDVTQLY
DPDKSVNEGA ITVPGYKPTS WPVQIIVASG LIDPDKPIRD YTDTELHNFL YREATKVRIS
NTNQTYEGLV VRVRRSFLSK DRDALQPHIR AFVDRAVTFR TCPDCDGTRL NEAARSSKIR
GISIADACAM QISDLAEWVR SLDEPSVAPL VATLQHTLDS FVEIGLGYLS LDRPSGTLSG
GEAQRVRMVR HLGSSLTDVT YVFDEPTIGL HPHDIQRMNE LLLRLRDKGN TVLVVEHKPE
VIAIADHVID LGPGAGAQGG TVCFAGTVDG LRASSTLTGR HLGDRVALKD TVRTPVGKLE
IRGATTHNLK NVDVDIPPRG AGGGHRGGWF GQEFAGARVD SG
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