Gene Tfu_1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1527 
Symbol 
ID3581701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand+ 
Start bp1757765 
End bp1758466 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content69% 
IMG OID637685222 
Productrare lipoprotein A 
Protein accessionYP_289586 
Protein GI72161929 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0105659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGAAC CGTGGCGGGT GCTTGACCAG GGTGGATCAT GGCGGGTAGA CACGGGTGCG 
GCCCTGGACA GCGGGGGTGG GTCGGGTGCG GGGCCGGCAG ACCAGTGGTT GGTGGAACGC 
AAGGGGCAAT GCGTGACAGG TCGATTCGTG GGGTTGAAGC CTGCCGTGGG GGTGGCTGCG 
GCGGCCGGGG TTGTGGCGGC TGTGGGTGTT GGGGTGGTTG TGGCGGTTCA CGGAGACGAG 
GGTGGGGGGT CGGCGGATGT GGGGGTGGTA AGCCCGCTGC CGCGGCATGC CCCCGCGGCC 
GGGGTGGAGG CGGGTGGGGA GGCGGCCCGC GCCAGGCAGC AGCGGGCGGT GGCTGAAGGG 
GTGCGGAGTC GCACGGTGGA GGTGGCGGCA TCCCGCCTTC CCGAACACCC CGATGCGGGG 
CAATCTGGAC AGTGTTTGGC CTCAATGTAT GGGGATCCGC AGCCGACCGC GTCCGGGGAG 
ATCTTCGATC CCACACAGTT GACCGCGGCA CACCCCACTT TGCCGTTTCA CACCATGGTG 
GAAGTCACCA ACACGGCTAC CGGGCGGAGC GTGACCGTGC GGATCAACGA CCGGGGCCCT 
TATGTGGCGG GGCGGTGTCT GGATTTGAGC ACTGCAGCGT TTTCCGCGAT CGCTTCCCTC 
GACCAGGGGG TGGTCCGCGT GTCGTGGCGG GTCGTGGGCT GA
 
Protein sequence
MAEPWRVLDQ GGSWRVDTGA ALDSGGGSGA GPADQWLVER KGQCVTGRFV GLKPAVGVAA 
AAGVVAAVGV GVVVAVHGDE GGGSADVGVV SPLPRHAPAA GVEAGGEAAR ARQQRAVAEG 
VRSRTVEVAA SRLPEHPDAG QSGQCLASMY GDPQPTASGE IFDPTQLTAA HPTLPFHTMV 
EVTNTATGRS VTVRINDRGP YVAGRCLDLS TAAFSAIASL DQGVVRVSWR VVG