| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1526 |
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| Symbol | |
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| ID | 3581700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1756834 |
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| End bp | 1757790 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637685221 |
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| Product | ribonuclease Z |
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| Protein accession | YP_289585 |
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| Protein GI | 72161928 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
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| TIGRFAM ID | [TIGR02651] ribonuclease Z |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00811682 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGACGC GGGAGCTCAT TGTTTTGGGG ACGTCCAGCG CGGTCCCCAC CAAGCGGCGC
GCCCACAACG GGTACTTTCT GCGGTGGGAT GGGCACGGCA TCCTGTTCGA CCCGGGGGAA
GGCACCCAGC GGCAGATGCG GTATGCGGGA ATCTCGGCGC ATGACATCAC CCGCGTGTGT
GTGACGCACT TCCACGGTGA CCACAGCCTG GGCTTGCCGG GGGTCATCCA GCGGATTGCT
CGGGACGGGG TCACCCACCC GGTGCGGGTG GCCTACCCTG CGGCGGGCCA AGAGTATTGG
GAGCGGCTGC GTTATGCCAC CTCGTTTGTG GACACTGAGG TCATTGAAGC GCAGCCGCTG
GCCGGTGACG AGGTGGTCGT CTCCGGTGAG GACGAGTTCA CGGTGACCGC GCTGCCGTTG
GACCATTCGA TCCCCACTTA CGGGTACCGG ATTGCTGAAC CGGATCGGGT GCACATGCTC
GCTGACCGGC TCGCGGCGCG GGGGATCCGC GGGCCAGCGG TCGGCAGGCT GAAAGCTGAA
GGGTTCCTCA TTGACGCTGC GGGGAACCGG GTGGAGCTTG CTGACTACAG TGTGGTGCGG
CCCGGGCAGG TGTTCGCGTT TGTCATGGAC ACGGGGGTGT GCGACACCGC GGTTCGGTTG
GCGGAGCGGG CTGATCTGCT GGTGATCGAG GCGACGTTTC TGAACGCTGA AGCGGAGCTG
GCTGCCCGCT ACCGGCATTT GACTGCTGGT CAGGCGGGGA TGATCGCTGC GCAGGCCGGG
GTGCGGCGTC TGGTGCTCAC TCATTTCTCT GAACGCTACG GCCGTGAAGA GGAGGACCGG
TTTATTGCTG AGGCGGCCGC CTGTTTTTCT GGGGAGATTG TGCTGGCCCA GGATGTGATG
CGGGTGGCGG TGCCGTCTCG CCGGTCGGAG GGTGGCGGAA CCGTGGCGGG TGCTTGA
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| Protein sequence | MSTRELIVLG TSSAVPTKRR AHNGYFLRWD GHGILFDPGE GTQRQMRYAG ISAHDITRVC
VTHFHGDHSL GLPGVIQRIA RDGVTHPVRV AYPAAGQEYW ERLRYATSFV DTEVIEAQPL
AGDEVVVSGE DEFTVTALPL DHSIPTYGYR IAEPDRVHML ADRLAARGIR GPAVGRLKAE
GFLIDAAGNR VELADYSVVR PGQVFAFVMD TGVCDTAVRL AERADLLVIE ATFLNAEAEL
AARYRHLTAG QAGMIAAQAG VRRLVLTHFS ERYGREEEDR FIAEAAACFS GEIVLAQDVM
RVAVPSRRSE GGGTVAGA
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