Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1519 |
Symbol | |
ID | 3580246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 1751078 |
End bp | 1751803 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637685214 |
Product | hypothetical protein |
Protein accession | YP_289578 |
Protein GI | 72161921 |
COG category | [S] Function unknown |
COG ID | [COG1656] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00627759 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACACG CATCGATAAC GCTACGGTTT GACCCCACAC TGCGGCCGCT CCTCGCCCCC CGCAACCGCA CCGACCTCCT CCACGTCAAC CACGACCCGG CCGCATCCCT GAGCCACGTG GTGGAATCAC TGGGCGTACC CCTCACCGAA ATCGGTGAAC TGCGCATCAA CGGCACCACT GCCTCCCCCT CCCAGCACCC TCAACCCGGC GACCTCATCG AAGTACTCAC CGTCCCGAAG CCCCAACCGG TGCCTTTCTC CCCCATCCGG TTCATCCTCG ACGTCCACCT CGGCACCCTG GCCCGGCGGC TACGCCTCCT CGGCGTGGAC ACCGTCTACT ACACCCACCG TGACGACCCT GCACTCGTCC AGCAGGCCAA CGAAGAGCAA CGGATCCTCC TCACCCGCGA CCGCGGCATC CTGTACCGCA AAAACCTGCG TGCCGGCGGG CACATCTACG CCAGCAACCC CGACGAGCAG CTCTTCGAAG TACTCGACCG CTACGCACCC CCGCTTGCCC CCTGGACCCG ATGCCTCACC TGCAACGGCC CCCTAGCCCA AGTCGACAAA GACAACATCG CCGACCAGCT CCCTGCAGGC ACACGAGCCA CCTACGACAC CTTTGTCCAA TGCACCGAAT GCCGCCAAAT TTATTGGCCA GGAGCCCATC ACGCACGGCT CACCCAGATC ATCGAAGCAG CTCAGAAACG TGTTGCCGCG ATTTGA
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Protein sequence | MQHASITLRF DPTLRPLLAP RNRTDLLHVN HDPAASLSHV VESLGVPLTE IGELRINGTT ASPSQHPQPG DLIEVLTVPK PQPVPFSPIR FILDVHLGTL ARRLRLLGVD TVYYTHRDDP ALVQQANEEQ RILLTRDRGI LYRKNLRAGG HIYASNPDEQ LFEVLDRYAP PLAPWTRCLT CNGPLAQVDK DNIADQLPAG TRATYDTFVQ CTECRQIYWP GAHHARLTQI IEAAQKRVAA I
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