Gene Tfu_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1519 
Symbol 
ID3580246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp1751078 
End bp1751803 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content64% 
IMG OID637685214 
Producthypothetical protein 
Protein accessionYP_289578 
Protein GI72161921 
COG category[S] Function unknown 
COG ID[COG1656] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00627759 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACACG CATCGATAAC GCTACGGTTT GACCCCACAC TGCGGCCGCT CCTCGCCCCC 
CGCAACCGCA CCGACCTCCT CCACGTCAAC CACGACCCGG CCGCATCCCT GAGCCACGTG
GTGGAATCAC TGGGCGTACC CCTCACCGAA ATCGGTGAAC TGCGCATCAA CGGCACCACT
GCCTCCCCCT CCCAGCACCC TCAACCCGGC GACCTCATCG AAGTACTCAC CGTCCCGAAG
CCCCAACCGG TGCCTTTCTC CCCCATCCGG TTCATCCTCG ACGTCCACCT CGGCACCCTG
GCCCGGCGGC TACGCCTCCT CGGCGTGGAC ACCGTCTACT ACACCCACCG TGACGACCCT
GCACTCGTCC AGCAGGCCAA CGAAGAGCAA CGGATCCTCC TCACCCGCGA CCGCGGCATC
CTGTACCGCA AAAACCTGCG TGCCGGCGGG CACATCTACG CCAGCAACCC CGACGAGCAG
CTCTTCGAAG TACTCGACCG CTACGCACCC CCGCTTGCCC CCTGGACCCG ATGCCTCACC
TGCAACGGCC CCCTAGCCCA AGTCGACAAA GACAACATCG CCGACCAGCT CCCTGCAGGC
ACACGAGCCA CCTACGACAC CTTTGTCCAA TGCACCGAAT GCCGCCAAAT TTATTGGCCA
GGAGCCCATC ACGCACGGCT CACCCAGATC ATCGAAGCAG CTCAGAAACG TGTTGCCGCG
ATTTGA
 
Protein sequence
MQHASITLRF DPTLRPLLAP RNRTDLLHVN HDPAASLSHV VESLGVPLTE IGELRINGTT 
ASPSQHPQPG DLIEVLTVPK PQPVPFSPIR FILDVHLGTL ARRLRLLGVD TVYYTHRDDP
ALVQQANEEQ RILLTRDRGI LYRKNLRAGG HIYASNPDEQ LFEVLDRYAP PLAPWTRCLT
CNGPLAQVDK DNIADQLPAG TRATYDTFVQ CTECRQIYWP GAHHARLTQI IEAAQKRVAA
I