| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1493 |
|---|
| Symbol | |
|---|
| ID | 3581686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 1725546 |
|---|
| End bp | 1726586 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637685188 |
|---|
| Product | putative ferrichrome transport system permease protein |
|---|
| Protein accession | YP_289552 |
|---|
| Protein GI | 72161895 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4779] ABC-type enterobactin transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0887097 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGAC CGTCCGCCCT GAACCTGCGT GTGGGCTCCG CGGTAGCGCT GCCCGTCCAC
CTGCGCTCCC TGCTGTGGGC GCTGCTGCTG GCGGCCGCCC TCCTCCTCAC CGTCGTGGCT
ACCCTCTCCC TAGGAAAGCT GGGGATTCCC CTCACCGACG TGGCCGACGT GCTCACCGGC
AACGCTTCCC CCGTCCACAT GTTCGTCCTC CACCGGTTGA GCGGGCCGCG CGTGACCGTG
GCCATCGGGG TTGGGGCTGC GCTCGGCATG GCGGGAGCCC TGTTCCAGTC CGTCACCCGC
AACCCGCTCG GCAGCCCCGA CGTCATCGGC GTGAACTGGG GGGCGAGCGC GGGAGCCGCC
CTCGTCGCCC TAGCGTTCCC CGGCACCGTC CCCGTGCCGC TCGGCGCACT GCTGGGCGCA
GTCGCCGCTG TGCTGACCGT GGCCACAGTG ACCGGAACCG GGCTGCGACA CCCCGGACGG
CTCGTCGTCG CCGGGATCGG TGTTGCCGCC ATGTCCGCGG CCTTCACCCA GTTCGTGGTC
GCTGCCCTCG CCCGCGACCA GGCCAGTGTG CTCGCCGCCT ACGTCAACGG CACCCTGTCG
GCACGCTCCT GGGAGCACGC GGCGACAATC TGGCTGGTGG TTGCCCTCGC TGTTCCGCTA
CTCGCTGCCC TCGCCCAACC GGTAGCACTC ACCGAGATGG GCGACGAGCT GGCCGACAGC
CTTGGCGCGC GGGCTACGCG GACCCGCACC GCCGCAATCA CCCTGTCTGT GGTCCTGGCA
GCGGGCGCAG TGAGCGTGGC CGGACCGATC GCGTTCGTCT CTTTGACCGC ACCGCAGATC
GCCCGCCGCC TCACCCGGCT CGCTGGACCC AACCTCGTGG TTTCCGCGCT CGTCGGTGCA
CTCATCCTCG CACTGGCCGA CCTTGCCGTG CAGCACTTCC CGTTCACCGA CGGGCTTCCC
GTCGGAATCG CCACCCTGGC CGTGGGCGGC ATCTACCTGG GCTTCCTGCT GGTACGCGAG
TGGCGGAGAG GAGCACTGTG A
|
|---|
| Protein sequence | MTRPSALNLR VGSAVALPVH LRSLLWALLL AAALLLTVVA TLSLGKLGIP LTDVADVLTG
NASPVHMFVL HRLSGPRVTV AIGVGAALGM AGALFQSVTR NPLGSPDVIG VNWGASAGAA
LVALAFPGTV PVPLGALLGA VAAVLTVATV TGTGLRHPGR LVVAGIGVAA MSAAFTQFVV
AALARDQASV LAAYVNGTLS ARSWEHAATI WLVVALAVPL LAALAQPVAL TEMGDELADS
LGARATRTRT AAITLSVVLA AGAVSVAGPI AFVSLTAPQI ARRLTRLAGP NLVVSALVGA
LILALADLAV QHFPFTDGLP VGIATLAVGG IYLGFLLVRE WRRGAL
|
|---|
| |