| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1475 |
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| Symbol | |
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| ID | 3579487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1705357 |
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| End bp | 1706652 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637685170 |
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| Product | TRAP-type C4-dicarboxylate transport system periplasmic component |
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| Protein accession | YP_289534 |
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| Protein GI | 72161877 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.177421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCACAC GACGTGGAAA CAAGGGTGCC GCCACTGCGG CATCCTGTCT CGCCCTCGGC
GTGGTGGGCG CACTCACCCT CACAGCCTGC GCCGACACAG CAACCAGCGC CGGTGGCGGC
TCCGGCCAGG GCGTCGAATA CGGGGCCAGC AAAGAGGAGT ACCAGGCCGC CTTCGCCGAC
CTGGACACCA TCACCCTGAC CACCCAGAGC CCCGCCCCCA AAGGCTCGGT GACCGGGGCG
AACGTCGAAG CCTACTTCGA AGCCCTCACC GAATGGTCCG GCGGCAAACT GCAGTTCGAC
ATCGCCTACG CCAACGCGAT CGTCGACCCC GCTGAAGCCG ACGACGCGCT GATCGACGGC
CGCCTCGACA TCGCCCAAGT CCTGCCGATC TACGAACCAG CGGAATACCC GGCCAACGCG
GCCCTCATCG AAGCCAGCTT CCTCTCCGAC CACAGCGTCG TCGTCGGCGC CCTGCAGTCC
AACGCCTGGC CGCTCGAAGT CGCCTTCAAC ACCCCCGAGG TCATGCAGGA GTACGAGGAC
AAAGGCATCA AACTCCTGCT GCCGTCCTAC AACTCCGGCT CCAACGCGCT GTTCTGCAGC
AAGGAACGCC GCAGCCTCAA AGACCTCAAA GGCATGCAGG CCGCGGCCGG CGGACAAGCC
CAGACCAAGG AGATCGAAGC CCTCGGCGGA TCCGCCGCCT CCGTCGCCTA CCCCGAGCTG
TACGAGAGCC TGCAGCGCGG CGTCGTCGAC TGCAGCGTCT CCAGCCTCAC CGTGGGTGTC
CTCGGCGGAT TCATCGAAGC CGCCCCGCAC GTCGTCGTCG ACCCCGAGGC AGGCTTCGCG
CTGGCCCCCG GCGCCATGGC CATCAGCCAA GCCACCTGGG ACTCGCTGCC CCTCGTCGCC
CAGCAGCTCA TGTGGGACCG TCTCGACGTC TTCCTCAGCA GCAACATCTC CGACAAGATC
TGGCCGAACA TCGTCGAAGC CTCCAAGCAG GTCGCCGACG CCGGCGGCTC CATCGAAGTC
TTCGAAGAAG ACGCCCGCAA GGCTCTCAAC GACGTCAACG CCGAACTCCT CGAGGAGCTG
AGCACCACCC CGGCCATCGA GGACGGTGAC GCGTTCGTCG CGCGGATCAA GGACGCGTCC
GCCAAATGGT CGACGATCGT CGAAGACGAG CTCGGCTACA CCAACGAGAC CGACTACAAC
GGCTTCGCCG AGTGGTACAC CGAGGACGCG GTCGACCTCG ACCCCTACGT GGCCAAGGTC
TTCGAGGAGA TCCTCCTCGA ACACCGCCCG TCGTGA
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| Protein sequence | MVTRRGNKGA ATAASCLALG VVGALTLTAC ADTATSAGGG SGQGVEYGAS KEEYQAAFAD
LDTITLTTQS PAPKGSVTGA NVEAYFEALT EWSGGKLQFD IAYANAIVDP AEADDALIDG
RLDIAQVLPI YEPAEYPANA ALIEASFLSD HSVVVGALQS NAWPLEVAFN TPEVMQEYED
KGIKLLLPSY NSGSNALFCS KERRSLKDLK GMQAAAGGQA QTKEIEALGG SAASVAYPEL
YESLQRGVVD CSVSSLTVGV LGGFIEAAPH VVVDPEAGFA LAPGAMAISQ ATWDSLPLVA
QQLMWDRLDV FLSSNISDKI WPNIVEASKQ VADAGGSIEV FEEDARKALN DVNAELLEEL
STTPAIEDGD AFVARIKDAS AKWSTIVEDE LGYTNETDYN GFAEWYTEDA VDLDPYVAKV
FEEILLEHRP S
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