| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1472 |
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| Symbol | |
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| ID | 3579484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1701298 |
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| End bp | 1702146 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637685167 |
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| Product | short-chain dehydrogenase/reductase (SDR) family protein |
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| Protein accession | YP_289531 |
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| Protein GI | 72161874 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0273044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAC GCCTGCGAGG ACGTGTCGCG GCGATCACCG GCGGAGCCAG CGGGATCGGG
GAAGCCACCG TGCGGCGCTT CCACACCGAA GGGGCGAGCG TGGTCATCGC CGACATCCAA
GCGGAAGCGG GCCGGCGCCT GGCCGACGAA CTGGGCGACC GCGCAGTGTT CGTCCGGACC
GACGTCAGCG AGGAAGCGGA CGTGGCTGCG CTCGTCGACA CCGCAGTGGA CCGCTTCGGG
CAGCTCGACA TCATGGTCAA CAACGCCGGG ATCATGGGTG CGCTCGGCCC AATCGACGCC
ACCCGCATGT CCGACGCCGA CCTCACCATC GCAGTCAACT TGCGCGGCGT CATCTGCGGG
ATGAAGCACG CCGCCCGCGT CATGAAACCC CGGCGCAGCG GTGTCATCAT CTCCACGTCC
AGCCCGGCTG GAGTGCTCGG CGGGATCGGA CCGCACATCT ACAGCGCGGT CAAAGTCGGC
ATCATCGGCC TGTCGAACTC GGTAGCCGCG GAACTACGCC AGCACGGGAT CCGGGTCAAC
ACGATCATCC CCGGCTCGGT GGTGTCCCCC ATGACCGCGG GCATCGTCGT CGACGATGCG
CACAACCTCG CCGGAGCCCA GGAAGTGCTG GGCCGCACCG CGCTCCTGGG GCGCCCCATC
CAACCCGCGG ACGTGGCCGC CGGAATCCTC TACCTGGCCA GCGACGACGC CGCGTTCGTC
ACCGGCGCGG TCCTGCCGGT GGATGCGGGG CTGACCGGGG CGAGCTGGCC TTCGCCCTAC
ACGTCGGGAC GCTACGCAAA GCCCGTGGCC CTGCTGGAGG CCGGGCGGCG CATCGGAGGG
GAGGAGTGA
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| Protein sequence | MTQRLRGRVA AITGGASGIG EATVRRFHTE GASVVIADIQ AEAGRRLADE LGDRAVFVRT
DVSEEADVAA LVDTAVDRFG QLDIMVNNAG IMGALGPIDA TRMSDADLTI AVNLRGVICG
MKHAARVMKP RRSGVIISTS SPAGVLGGIG PHIYSAVKVG IIGLSNSVAA ELRQHGIRVN
TIIPGSVVSP MTAGIVVDDA HNLAGAQEVL GRTALLGRPI QPADVAAGIL YLASDDAAFV
TGAVLPVDAG LTGASWPSPY TSGRYAKPVA LLEAGRRIGG EE
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