| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1466 |
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| Symbol | |
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| ID | 3579478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1694249 |
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| End bp | 1695052 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637685161 |
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| Product | short-chain alcohol dehydrogenase |
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| Protein accession | YP_289525 |
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| Protein GI | 72161868 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.137862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATTT CAGGCCGTTT GACGGACAAG ATCGCACTCA TCACCGGAGC CGGATCGGGA
TTCGGACGCG CCAGCGCCCT GCGTTTCGCA GCTGAAGGAG CCTCCGTGGT CTGCGTCGAC
CGCAACGCCG ACGCTGCCCA CAGCGCCGCT GACGACATCG CCGCCGCAGG CGGCACCGCC
CTCGCACTCA CCGCCGACGT GTCCTCCGCT GCCGACGCGG AACGAATGAC TACCACCACG
CTGGAACACT TCGGCCGCAT CGACATCGTC TTCGCCAACG CGGGCATCCC CGGCTCCGGC
GACGCCCACA CCACCACCGA AGAAGAATGG GACCGGGTCA TCGCCATCAA CCTCAAAGGC
GTCTGGCTGA CCTCCAAATA CGCGCTGCCG CACATGGTCG AACGCCGCAG CGGGGTCATC
ACCAACCAGG CCAGCGTCGG CGGGCTCATC GGCATCCCCG GCATCTTCCC CTACGCCGCA
GCCAAAGGCG GCGTGATCTC CATGACCCGG CAAATGGCCG CCGCCTACGC ACCCCACAAC
ATCCGGGTCA ATGCGATCTG CCCGGGCGGG GTCTACACCC CGCTGGTGGA ACTGTCCCGT
CAAAAGCGCG GCCTGACCGC CAGCAGCGTC GAGGAAGCCA ACGCTATCGC CGCACGCAAC
TACCCCCTGG GCCGTCTCGG CACAGTGGAG GAGATCGCCT CCCTCGCCCT CTTCCTCGCC
AGCGACGAAG CCGCCTGGAT CACCGGGGGC ATCTACCCCG TTGACGGCGG ACGCGGCGCG
GTAGGGACCA TTCCCACCGA CTGA
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| Protein sequence | MAISGRLTDK IALITGAGSG FGRASALRFA AEGASVVCVD RNADAAHSAA DDIAAAGGTA
LALTADVSSA ADAERMTTTT LEHFGRIDIV FANAGIPGSG DAHTTTEEEW DRVIAINLKG
VWLTSKYALP HMVERRSGVI TNQASVGGLI GIPGIFPYAA AKGGVISMTR QMAAAYAPHN
IRVNAICPGG VYTPLVELSR QKRGLTASSV EEANAIAARN YPLGRLGTVE EIASLALFLA
SDEAAWITGG IYPVDGGRGA VGTIPTD
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