| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1444 |
|---|
| Symbol | |
|---|
| ID | 3581508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 1671926 |
|---|
| End bp | 1673263 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637685141 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_289505 |
|---|
| Protein GI | 72161848 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1266] Predicted metal-dependent membrane protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGGAGGA CCGTGCCGCC CGTAGGTCGA CCTACTGTCC AGTACGGAAC CCCCTATAGT
CGGAGCTGTG ACGCCGAACA GTCCCGCGCT GGCCGTGCCC TGGTCTGGCC CCCGTGCCGC
CCCTGTGCTC TTGGCCGCGC GGCAGCGCTG CACCGGTGCT GGGGGCGCCT GCGGCGTACC
GTGCCGAGGA AGGGGGCACC CGTTGTGCAG GACAGCACCG ACGGCCACTG CTGTGGACCG
GGGATTGCGG TGCGAGCCTT GGTTGCCTCT CCCCCACTGG CGGGCCGCGA GCCGGACATC
CGCGCCCCGG CTCCTTCCCC CACCCTGCCC TGTACCGCGC AGCAGCGCTG GCGGCAATCG
GCCACCGCCC CCGAAACTCA GAGAGGGAGT ATGACTGCCG ATCGCAGCCC TTTTGCCCTG
TCCCTGTCCG TCTTCCTGCT TCTTTCGTTT GGCCTGTCGT GGCTGCTTGC GCTCCCGCTG
TGGCTCGGCG ACGGGCTTGA GGACCCGCTC TTCTACCCCA TTGCCGTGGC CATGATGGGT
ACGCCCGCAA TCGCGGCGCT CGTGGTCGTC TTCTTCGTGG AACGCCCACC GCAGCGGGCC
CGCTCCCTTG CCCTGTGGCC GCTGACCCCC GCGGGCCGGT TGATCGGCTA TCTCGCGCTC
GCCTTGGTCG TCCCGATCCT GCTTATCCTG GTCGCACTGC CGGTCGGCGC CCTGCTCGGC
GTGTACCCAG CGGACTTTGC CCACCTCTCC GGATTCCAGG AGCTCATCGA CGCCGGCGTG
GCAGAGCTGG GTATACCCAT CCCCGACATT CCGATCGGTG TCCTGCTCGC CTTCCAATTC
GTGAACGTCA TCATCGGCGC GTTCCTCAAC CTCATTCCGG CACTGGGTGA AGAGCTGGGC
TGGCGGGGCT GGCTGCTGCC GCGCCTGTAC CGGTTCGGTG CCGCACCTGC CCTGCTGATC
AGCGGCATCA TCTGGGGTCT GTGGCATGCG CCGGTGATCT TGCTCGGCTA CAACTACCCG
GATGCGCCCG GTTGGCTGGG CCTGCTCATG ATGGTGGGAA TGTGCGTCAT CATCGGCGCT
GTCTTCGGCT GGCTGCGCAT GCGGTCCGCC TCCGTGTGGC CCGCAGCGCT CGCGCACTCC
TCCTTCAATG CCGCGGCCGG ATTCCACCTG GTGTTCGCCC AGGCCGGGCA GACAGTCAAC
ACCGTGCACG CCTCCATCCT CGGGTGGAGC GGGTGGATCG TCCCCATCCT GCTCGTTGCG
GTGCTGTGGG CTACCGGCCA GTTCCGGCCC GCTCCGGTGG AACCGGAGCG CCCTGAACCT
CACAAGGAGC TCGAATAG
|
|---|
| Protein sequence | MGRTVPPVGR PTVQYGTPYS RSCDAEQSRA GRALVWPPCR PCALGRAAAL HRCWGRLRRT
VPRKGAPVVQ DSTDGHCCGP GIAVRALVAS PPLAGREPDI RAPAPSPTLP CTAQQRWRQS
ATAPETQRGS MTADRSPFAL SLSVFLLLSF GLSWLLALPL WLGDGLEDPL FYPIAVAMMG
TPAIAALVVV FFVERPPQRA RSLALWPLTP AGRLIGYLAL ALVVPILLIL VALPVGALLG
VYPADFAHLS GFQELIDAGV AELGIPIPDI PIGVLLAFQF VNVIIGAFLN LIPALGEELG
WRGWLLPRLY RFGAAPALLI SGIIWGLWHA PVILLGYNYP DAPGWLGLLM MVGMCVIIGA
VFGWLRMRSA SVWPAALAHS SFNAAAGFHL VFAQAGQTVN TVHASILGWS GWIVPILLVA
VLWATGQFRP APVEPERPEP HKELE
|
|---|
| |