Gene Tfu_1416 details

Gene Information

• Locus tag: Tfu_1416
• ID: 3580967
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: -
• Start bp: 1640698
• End bp: 1642767
• Gene Length: 2070 bp
• Protein Length: 689 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637685113
• Product: putative secreted penicillin binding protein
• Protein accession: YP_289477
• Protein GI: 72161820
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0768] Cell division protein FtsI/penicillin-binding protein 2

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.451828
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTGGTACT CCGGGTCGTG GCGTGCCCGG GCTCTGACGC GGAAACTCCG GGCGCGGTCC 
GCACGGTCCC AGGGGACGGC GCCGTGCTCT CTGCTGCGCA GCAGCCGCAC CAGTGCGCTC 
TTCCGCCCCG TATGTCCTTC CCCGCGGGGC CTGCTCCCCA TACCGACCCC GATCTTAAGG 
ACACTACTTT TGAGCGTGGA CGACGAAGGG ATCTTCCGGG AACGTCCCTA CCAGCCGCAG 
CCCCCGCCCC CTGCCCCGGG CAGCGGGCAC CGTCCTGCGC CGGGGGGCGC ACCCTCACAC 
GGTTTCCCTC ACAGCCCGTA CCGCCTCCCT AGGGAGACTC CCGCTTCCTG GCACGTTCAG 
AGCGCCGGGC CCGCTCGCGG GGAGGGACCT CTCCCAGGGA GTGCGCGTCC CGCCCCAGCT 
CCGCGGCGGT CCCGGCGCGG CCTCCTGTTC TCCGTGCTCG CCGCGGTCCT CGTGGCGGCG 
CTGCTGGGCG GCGGCGTCTA CTGGTACCTG TCCTCCCGCC CGGTCCCCGA AGAGACCGCT 
GACGCGTATG TGGCGGCCTG GACGTCGGGG GACTACTCCA CGCTCGACCA GTGGGCGACC 
TCCTCGGAGG CGTCCGCGTT CTACACCGAG GTGGCAGAGA ACCTGGGAGT GGAGTCGGTC 
GAGGTGACCA CGGGGGAAGC GGTGGTGGAC GGGGACACAG CCACTGTTCC CTTTACTGCC 
ACGTTCACCT TGAGCCACAG CGGGACGTGG ACCTACGACG GGGAGCTGCC GCTCCAGCGG 
ATCGACGGCC AGTGGAAGGT CGACTTCAGT CCCGCAGTGC TGCACCCGGA GCTGGGTCCC 
GGCCAGACGT TGGCGCGCAC CAACGCGTGG GGGGAGCGCG GCCGGGTGCG GGCCGCCGAC 
GGCACCCCCG TGGACACCTC TGACGTGTCC GGGTCAATCC AGATGATCGT CGGGGAGGTC 
GGCCCCGCCA CCGCTGAGGA CGCGGCGGAG CTCGGCCCCG CCTACCAGGA GGGCGACCCG 
GTGGGGAAGA GCGGCATCCA GCGGTCGCAG CAGGATCGGC TCGCGGGGAC GCCGACCACG 
GTGATCCACG TCGTCGACCA GGGGGCGCCG CCTGAAGGGG AGCCGGAGGA TGCGGCGGTG 
GTCGGCACTA TCGAAGGCAG TCCCGGCCAG GACGTCACCC TCTCCATCGA CATGGCGGTG 
CAGCAGGCCG CGGTCGACGC CGTGATCGGA CAGCGTAAAG CCACTGCCCT GGTAGCGGTC 
CGGCCGTCGA CGGGGGAAGT GCTGGCCGTG GCGAATGTTC CAGGCGGGTT CAACCGGGCT 
TTGGAAGGCC AGTACGCTCC TGGCTCCACG TTCAAGATCA TCTCCTACGA CGCACTGCTG 
GACGCCGGGA TGGGCATGGA CGCCACCCTG GACTGCGCGG AGACCGTCAC CGTGGGAGGG 
TGGCCGTTCA AGAACGCGGG AGACGCCGCC TACGGTGAGC AGAGCGTCAC GGAAGCGTTC 
GCCACCTCCT GCAACACCGC GCTGATCTCC GAGGTGGTCC ACCGGTTGGA CGGCGGCTCC 
TTGACTGCCG CGGCCGAACG GTACGGGTTC AACCGCGACC TGAGCCTCGG GGTGCCCGCG 
TTGACGCCGT CGTTCCCGAC CCCGGACAGC GACACCCTGC TGGCTGCCGC GAGCATCGGG 
CAAGGACAGA TCCTGACCTC GCCGCTGCAC ATGGCGACGA TTCCCGCGGC GGTGGCCGAC 
GGGCACTGGC GTCCCCCGGT GCTGGTCACC GACCCGGCCC CGGCGGGCCT TCCCGACCCG 
GTCCCGGTGC CCGCTGCCGA GCAGCTGCGC ACCTTGATGC GTGCGGTCGT CACTGACGGC 
ACCGCTAAGA ACGTCGGCTT TTCCGGGGAC GTGCACGGGA AGACCGGCAC CGCCGAATAC 
GGTGAATACG TGGAAGACGA GGAAATGTCC GCGCACGGCT GGTTCGTCGG TTTCGAAGGC 
GACGTGGCCT TCGCGGTACT CGTCGAGGAC GGTGGTAGCG GGGCGAAAGC CGCCGCTCCG 
GTGGCCCGGC GCTTCTTGGA AGGGCTGTGA 

 

Protein sequence

MWYSGSWRAR ALTRKLRARS ARSQGTAPCS LLRSSRTSAL FRPVCPSPRG LLPIPTPILR 
TLLLSVDDEG IFRERPYQPQ PPPPAPGSGH RPAPGGAPSH GFPHSPYRLP RETPASWHVQ 
SAGPARGEGP LPGSARPAPA PRRSRRGLLF SVLAAVLVAA LLGGGVYWYL SSRPVPEETA 
DAYVAAWTSG DYSTLDQWAT SSEASAFYTE VAENLGVESV EVTTGEAVVD GDTATVPFTA 
TFTLSHSGTW TYDGELPLQR IDGQWKVDFS PAVLHPELGP GQTLARTNAW GERGRVRAAD 
GTPVDTSDVS GSIQMIVGEV GPATAEDAAE LGPAYQEGDP VGKSGIQRSQ QDRLAGTPTT 
VIHVVDQGAP PEGEPEDAAV VGTIEGSPGQ DVTLSIDMAV QQAAVDAVIG QRKATALVAV 
RPSTGEVLAV ANVPGGFNRA LEGQYAPGST FKIISYDALL DAGMGMDATL DCAETVTVGG 
WPFKNAGDAA YGEQSVTEAF ATSCNTALIS EVVHRLDGGS LTAAAERYGF NRDLSLGVPA 
LTPSFPTPDS DTLLAAASIG QGQILTSPLH MATIPAAVAD GHWRPPVLVT DPAPAGLPDP 
VPVPAAEQLR TLMRAVVTDG TAKNVGFSGD VHGKTGTAEY GEYVEDEEMS AHGWFVGFEG 
DVAFAVLVED GGSGAKAAAP VARRFLEGL