| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1389 |
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| Symbol | |
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| ID | 3581016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1610243 |
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| End bp | 1612042 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637685086 |
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| Product | carbon starvation-induced protein |
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| Protein accession | YP_289450 |
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| Protein GI | 72161793 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGCCG TTGTCGTACT GGTCGCTGTT CTCGCCCTCT TCGCTCTGGG ATACCGCTAC
TACTCGTCGT ATCTGGCCCG CCGCGTCTAC GGGCTGGACC CCAACTATGT GACCCCCGCC
CACCGCTACT CCGACGGGGT CGACTTCGTC CCCACCAACC GTTACGTCGT TTTCAGCCAC
CATTTCATCT CCGTGGCCGG AGCCGCCCCC ATCGTCGGCC CCGCGGTCGC CGTGTTCTGG
GGCTGGGGCC CGGCCCTGCT GTGGGTGGTG CTCGGCACGA TCTTCGCTGC GGGCGTGCAC
GACTTCGGGG CGCTCGCGGT CTCGGTCCGC CACCGCGCGA AAAGCATCGG CACGCTCGCC
GGTGAGGTGG TGAGCAGACG CGCCGGCACC CTCTTTCTGA TCATCATCTT CTTCCTGCTG
ACCCTGGTGA ACGCGGTCTT CTCCGTGGTC ATCGCCAACC TGTTCGTTTC CACCCCTAGC
GTGGTGCTGC CCACCTTGGT CACGATTCCC TTGGCGATCG GTGTGGGCCA GTACGTCTAC
CGCACGCGCA GCGCGGCACT GCTGCCGTCC CTGGTCGTGC TGCTGCTGGT GTACGCGTCC
ATCCCGCTGG GCCTGCTGTT CCCGATCACT ATCGACCCGC TGGCTGCCGC GGTCGGCCTC
ACCCCGAAAA CCCTGTGGAT CATCCTGGTC TTCGGCTACG CTTTCGCGGC GTCCCGGCTG
CCAGTGTGGC TGCTGCTGCA GCCGCGCGAC TACATCAACC AGCAGCAGAT GCTGGTGGCG
TTGGCGGTGA TCCTGCTGGG CGTGGCCGTA GGCTTCGACT GGATCGTGGC GCCTCTCATC
AACGACGTGC CCGACGGATC CCCGCCCTGG TTCCCCCTGC TGTTCATTAC CATCGCCTGC
GGGGCGATCT CCGGGTTCCA CAGCCTGGTC TCCTCGGGGA CGACAGCGAA GCAGATCGAC
CGGGAAACCG ACGCCCGTTT CGTCGGCTAC CTGGGTGCTG TCGGGGAGGG CACGCTCGCG
CTGTGCGCCA TCCTGGCCTG CACGGCGGGC GTGGCGGCGA CCCGCGCCGA CTGGGATGCG
CTCTACACGG ACTATGCGAC CGCGTCGGGC AGCGCCACCG ACAACTTCGT CAACGGGGTG
GCGAACTTCG CGTCCCACCT GGGCATTCCC GAAACCGTGG GTGTGGTGTT CGCCGCCGTG
GTGATCATCA GTTTCGCGTC CACCACCATG GACACGGGGG TGCGGCTGCA ACGCTACATC
GTGCAGGAGA TCGCGGAGAC CGCCCGGATC CGGCCGCTGG CACGCAACCT CACCTTGGCG
ACCCTGGTGG CGGTGGCGGT GCCGTTGGCG TTGGCGCTCA CCCCGGGCGA CTTCGCGTTC
GGCACCCTTT GGCAGCTGTT CGGCACCACC AACCAGCTCA CCGCCGGACT GGCGTTGGCG
GTGATCGCAG TATGGGTCAC CAAGAGCAGC CGCAACCCGC TCGCGGTGCT CATCCCCCTG
GTGTTCCTGC TCGTCATGAC CTCGTGGGCG CTGGTCCTCA ACCTGGTCCG GTTTGTGACC
GCTGACGACC CCATGCAGGT GTTCCTGCTC GCCCCCTTGG ACGCGGTCAT CTTCGTGCTT
GCACTGTGGC TGATCGTTGA AGCGTCGCTG GCGCTGCGGA CCGCGTGGCG GGCCCGCACG
GCTGCCGCCG GCACTCCAGC AGTCCCGGCA GCGGACCCGA AGACCGGTAC GGATGCGGCC
CCGCCCGCGG GGGACAGCCC GACGGATCCG GCGGAGCCTG CGGGAGCAGG GGAGCAGTGA
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| Protein sequence | MPAVVVLVAV LALFALGYRY YSSYLARRVY GLDPNYVTPA HRYSDGVDFV PTNRYVVFSH
HFISVAGAAP IVGPAVAVFW GWGPALLWVV LGTIFAAGVH DFGALAVSVR HRAKSIGTLA
GEVVSRRAGT LFLIIIFFLL TLVNAVFSVV IANLFVSTPS VVLPTLVTIP LAIGVGQYVY
RTRSAALLPS LVVLLLVYAS IPLGLLFPIT IDPLAAAVGL TPKTLWIILV FGYAFAASRL
PVWLLLQPRD YINQQQMLVA LAVILLGVAV GFDWIVAPLI NDVPDGSPPW FPLLFITIAC
GAISGFHSLV SSGTTAKQID RETDARFVGY LGAVGEGTLA LCAILACTAG VAATRADWDA
LYTDYATASG SATDNFVNGV ANFASHLGIP ETVGVVFAAV VIISFASTTM DTGVRLQRYI
VQEIAETARI RPLARNLTLA TLVAVAVPLA LALTPGDFAF GTLWQLFGTT NQLTAGLALA
VIAVWVTKSS RNPLAVLIPL VFLLVMTSWA LVLNLVRFVT ADDPMQVFLL APLDAVIFVL
ALWLIVEASL ALRTAWRART AAAGTPAVPA ADPKTGTDAA PPAGDSPTDP AEPAGAGEQ
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