Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1378 |
Symbol | |
ID | 3581957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1597173 |
End bp | 1598618 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637685075 |
Product | helix-hairpin-helix DNA-binding motif-containing protein |
Protein accession | YP_289439 |
Protein GI | 72161782 |
COG category | [R] General function prediction only |
COG ID | [COG3800] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.84072 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGACTT TGCCAAGTGA CCTAGATCTC GTCACCTTTG GCCAGCGGCT GCGCCACCTC CGCCGCGCCC GCAACATGAC CCTCGCTGAA CTGGGAGAAC GCGTAGGACG CGCCCCGTCC CAGCTCTCCC TGCTGGAAAA CGGCAAGCGG GAACCCAAGC TCTCCCTGCT CACCGCGCTC GCCAAAGCCC TCGACGTCTC TGTGGAGGAG CTCCTCTCCC GCCAGCCCCC CAGCCGCCGC GCCCAACTAG AGATCGCCCT CGAAGAAGCC CAGCGGGACC CCCTCTACCA GTCCCTCAAC CTGCCCCACC TCAAAGTCGG CAAGCGCGTC CCCAACGACG TCCTCGAACA CATCGTCACC CTCTACGAGG AACTCAAGCG GCGCGCCGCC AAACCCACCA CCACGAACGA GGAAGCCCGC CGCGCCAACG CGGAACTCCG CCGCCTCATG AGCGAGCGCG ACAACTACTT CCCCGAGATC GAAAAAGCCG CGCGGGAAAC CCTCGAAGCC GTCGGCTACC AAGGCGGGGC ACTCTCCCAG GGCATGATCC TCGCCATCGT CGCCCACCAC GGATTCACCC TGCGCTACGT CCCCGACCTG CCCCGCTCGG TGCGCTCAGT CACCGACACC CGCAACCGCC GCATCTACCT CAAGCGGGAA TCGCTGGGCA TGCACACGCC GCGCACCATC CTGCTGCAGA CCCTCGGCCA CTTCGTCCTC GGCCACACCC CGCCCCGCGA CTTCGCCGAC TTCCTCCGCC AACGCGTGGA AGCGAACTAC TTCGCCGCCG CGGTCCTCAT CCCCGAATTC ACGGCCGTCC CGTTCCTCAC CGAGGCCAAA CGGCAACGCG ACCTGTCCGT CGAAGACCTC CGCGACGTCT ACGCCGTCTC CTACGAGATG GCCGCCCACC GGTTCACCAA TCTGGCCACC CGCCACCTCG ACCTCGTCTG CCACTTCATC CGCAACGACG AGACCGGCAT CATCTACAAG GCCTACCAAA ACGACGGGCT GATCTTCCCC ACCGACGACA CCGGGGCCAT CGAAGGCCAG CGCCTGTGCC GCTACTGGGC GGGCCGCCAA GTCTTCGCCT CCCCCGACCG CTATTCGATC TACTACCAGT ACACCGACAA ACCCAACGGC ACCCACTGGT GTGTGGCCCA TGTCGACCCC AGCCGGGAAC GCAACTTCGC CATCACCCTG GGCGTGCCCT ACAAGGAATC GCGGTGGTTC CGCGGCCGGG AGACCACCAA CCGCACCAAA TCCGAGTGCC CGGTCGGGGA ATGCTGCGTG CGGCCCCCCT CGGAGCTCGC CTCCCGTTGG GAAGGCAACG TCTGGCCGTC GGCCCGCGCC CACTCCCACG TCCTGGCCGC CCTGCCCACC GGCCAATTCC CCGGCGTCGA CGAGACCGAC GTCTACACCT TCCTCGAAAA ATACGAGACC GCATAA
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Protein sequence | MPTLPSDLDL VTFGQRLRHL RRARNMTLAE LGERVGRAPS QLSLLENGKR EPKLSLLTAL AKALDVSVEE LLSRQPPSRR AQLEIALEEA QRDPLYQSLN LPHLKVGKRV PNDVLEHIVT LYEELKRRAA KPTTTNEEAR RANAELRRLM SERDNYFPEI EKAARETLEA VGYQGGALSQ GMILAIVAHH GFTLRYVPDL PRSVRSVTDT RNRRIYLKRE SLGMHTPRTI LLQTLGHFVL GHTPPRDFAD FLRQRVEANY FAAAVLIPEF TAVPFLTEAK RQRDLSVEDL RDVYAVSYEM AAHRFTNLAT RHLDLVCHFI RNDETGIIYK AYQNDGLIFP TDDTGAIEGQ RLCRYWAGRQ VFASPDRYSI YYQYTDKPNG THWCVAHVDP SRERNFAITL GVPYKESRWF RGRETTNRTK SECPVGECCV RPPSELASRW EGNVWPSARA HSHVLAALPT GQFPGVDETD VYTFLEKYET A
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