Gene Tfu_1350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1350 
Symbol 
ID3580364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand+ 
Start bp1566200 
End bp1566865 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content43% 
IMG OID637685047 
Producthypothetical protein 
Protein accessionYP_289411 
Protein GI72161754 
COG category[R] General function prediction only 
COG ID[COG4889] Predicted helicase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.588656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGGAATG AAAGATGTGA GCGAGTAGAT AACATTACCA ATGCTGCTCT AATAGGGCAT 
CGAGCTGTTT ATAATAATCC TAACACAGTC AAAGACGAAA TTTTCTACTA TATTTATAGT 
ATTCTTCGCT CTCCTGAATA TAGGAATCTT TTTGCGTCTG ATTTGAAAAA GTCTCTTCCT 
TGCATTCCTA AAGTCCAAAA CTTTTACGGA TTTGTTGAGG CTGGACGTAA ATCAACCGAT 
TTGCATCTAA ATCATAAAAA AGTTGAGCCT TATGGTGGTA TTCTTGAGGA AGTAAAACCG 
AGATCTTTGG AAATTCCTCT AAGAGAACTG TACCGAGTTG CCAAGATGGA ATTTCCCCGA 
GTAAAGGGAA AGGTGGGCCG CTCTACAATT ATCTACAACA CTTGGATTAC GCTTCCCAAT 
ATCCCGGAAG AAGCCTATCG CTACCAGCTC GGTGCACGAT CCGCAATTGA ATGGATTATT 
GACCGCTGCC AATTTAAGAC TGACAAGGCA TCAGGAATCG TCAACGATCC CAACGACTGG 
GCTGACAATC CTCGTTACAT AATCGACCTC CTCAAACGTA TCGTCACGGA CGGTCATGGC 
CCCAGAGATA TAGCCGTACC ACAGCAAGCA TTAGGAAGGA AAATTGCTGT GAAGGAAGCT 
CTGTGA
 
Protein sequence
MGNERCERVD NITNAALIGH RAVYNNPNTV KDEIFYYIYS ILRSPEYRNL FASDLKKSLP 
CIPKVQNFYG FVEAGRKSTD LHLNHKKVEP YGGILEEVKP RSLEIPLREL YRVAKMEFPR 
VKGKVGRSTI IYNTWITLPN IPEEAYRYQL GARSAIEWII DRCQFKTDKA SGIVNDPNDW 
ADNPRYIIDL LKRIVTDGHG PRDIAVPQQA LGRKIAVKEA L