Gene Tfu_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1341 
Symbol 
ID3579313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp1554798 
End bp1555484 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content69% 
IMG OID637685038 
Producturacil-DNA glycosylase 
Protein accessionYP_289402 
Protein GI72161745 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTCCG CCATGCCACG ACCGTTGCAC GAAATCATGG AGAGCGGGTG GGCCGAGGCA 
CTGGAGCCCG TGGCCGACCG TATCGCGCAG ATGGGTGACT TTCTGCGGCA GGAGGTGGCC 
GAAGGCCGCA CCTACCTGCC TGCTGGGGAG AACGTGCTGC GCGCCTTCCA GCAGCCTTTC 
GACCAAGTGC GGGTGCTCCT TGTCGGCCAG GACCCCTACC CCACGCCGGG GCACGCTGTC 
GGGCTGAGCT TCTCCGTCTC CCCCGAAGTG CGCCGCCTGC CGGGCAGCCT GCGCAACATT 
TTCCTCGAAT ACACCCAAGA CCTCGGGTAT CCGATGCCGT CCAGCGGGGA CCTCACCCCG 
TGGGCGGAAC GCGGCGTGCT GCTGCTCAAC AGGGTGCTGA CCGTGACCCC GCGCAAACCG 
GGATCGCACC GCGGCAAAGG CTGGGAAGCC GTCACCGACC AGGCGATCCG CGCCCTCGCT 
GCCCGCGGCA AACCACTCGT GGCCATCCTG TGGGGCCGGG ACGCGCGCAG CCTACGCCCG 
CTCATGCCGG ACGTGCCGTG CGTAGAGTCC GCCCACCCCA GCCCCATGTC GGCGCACCAC 
GGCTTCTTCG GTTCCCGCCC GTTCAGCCGC GCCAATGCCC TGCTGGAACA GCAGGGCGCC 
GAACCCATGG ACTGGCGGCT GCCCTAG
 
Protein sequence
MVSAMPRPLH EIMESGWAEA LEPVADRIAQ MGDFLRQEVA EGRTYLPAGE NVLRAFQQPF 
DQVRVLLVGQ DPYPTPGHAV GLSFSVSPEV RRLPGSLRNI FLEYTQDLGY PMPSSGDLTP 
WAERGVLLLN RVLTVTPRKP GSHRGKGWEA VTDQAIRALA ARGKPLVAIL WGRDARSLRP 
LMPDVPCVES AHPSPMSAHH GFFGSRPFSR ANALLEQQGA EPMDWRLP