| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1338 |
|---|
| Symbol | |
|---|
| ID | 3579310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 1547778 |
|---|
| End bp | 1550780 |
|---|
| Gene Length | 3003 bp |
|---|
| Protein Length | 1000 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637685035 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_289399 |
|---|
| Protein GI | 72161742 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.917741 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCGGGAC TCGGTAGCCT GCTGCCGGCA GCCGTTCTGC GGTGCCGGGC ACTTTGGCGA
ACTTCGGTGG TGGCATTGCG CGAACCCGTC CGATACTGCG ATGCGATCCG GCTTTTGGGT
GCCGACGATC CGGACGTGGT CGAGTTGATC GACCAACTTG TTGCTGACGA AGCCACTGAC
CTTCTCGCCG CGCGCACCGA ACTCGTAGGG TTCACCCACC AGGCACTCAA CCGCTTGGAC
CGGGAAGCCC ACCTGCTCAC CCGGGTGGAG CGCACCCGCT ACATTGCCGC CGCGCACAGC
GCTATCGTCG TCACCGCGTT CTTCGAATCC CTCGACGACA CAGAACTCCC GTTCCGGTTG
GACAACGGGC TGGACGACGC TGCCGCAGGC GTAGCGGACC GCAAACGGCT CGGCGAGTTC
GTGGCGCTGC TGGTGGCGTC CGCGCCGCCG CTCCCCCGCC CGCAGCGCAG CACCGCCGAC
GGGCGGGCCC GGGTGCGCCG CTTCTACCTG CGCCGCTGCA AACAGTTGCC GTCGGTGCTG
CGCGGCATGC CGCTGTGGGA GGAGCTCGAC GAGTCGCAGC GCAGAGCGAT TACGGAACGG
CTCGGTGCTT CGCTCGCAGA CCGGTGTGTG CGCCGCTATG AAGAACTGCG GGACAAGCTC
GCTGCGAGCT TCCCCGAGTT CGGGGCGTGG GCGAGCTTGT CGATGGTCCG GGCTCGCACA
TCGGTGACGG ACGTGCCTAT GGGGCTGTCC CGGTTGCAGC ACCGGTTGCA GTCGATCAGC
ACGGGGCGGG TGCCGAGCGC GGTGCGGGGC GCACTGGCCC GCGCCCACGA GGAGCGGCTC
AACGTGCCGC CGGTCCGGCA CACGGGCGGC ACCCATATCC CCCCGCTGTC CATCTCCTAC
ATCAACCCGT GTTTCCGGGT CACTGAGATC ACCGCGCACG CGCGTCCCCA CGATGCGGCG
TGGTGGGAGG AGCACACCGA AGTCCGCGAC GATCTCGCGG AATTCCTGCT CGGGTATGTC
ACGTCCCCCC GGGCTCTCAC CCATCCGCTC ATCGTGGTGG GGCCGCCGGG GTCCGGGAAG
TCCGCGTTGG CGTCGGTGCT GGCGGCGCGG CTGCCCGACA GCGATTTCAC GGCGGTGCGG
GTCAGCGGCC GCAACCTGCC CGCCGACGGG TACGACCGGG TGCTGGCGGA CCGGTTCGCT
GAAGCGTTGG CGGCGGCCGG GGGCGGCAAC TGTGATGCGC TGCCGGTGCT GATCCTCGAC
GGGTTGGAGG AGGTCACCAC CCGGTCGTTG GCGTCCCGCA GCGACCTGTT GGCCGGTGTG
ACGCGGTTCC AGCGGGAGCG TGCCGCGGGC CCGGACCCGG TGGCGGTGGT GGTGACCTGC
CGTGACTCGA CGGCGGCACG GATGCGGTTC CCGTTGGGGA GCGTGGTGCT GCGGTTGGAG
GATTTCACTG ACGCGCAGCT CGCCACCTGG TTGTCGATCT GGAATCGGGT GAACTCCAGC
TACTTCCACC ACCACGGGGT GGCGTCTTTG GACTGGGAGA CGGTGGAGGC GCACTTCCCG
TTGGCGCGGC GTCCCCTGTT CCTGCTGATG TTGGCCCTCT ACGACGGGGT GGGTAACGCG
TTGCGCCGGG TGAATGCGCC GCTGCGCGAA ACCGCGTTGT ATGAGCGGTG GCTGCGTATG
CTCGCCGACT CCACGGACCG GGCGGATCCG GTGGCGACCG AGCGGCCCGC GGAAGCGGAA
AGCGACCCGG AAGTCCGGTC GGGGCGGATC GAACAGGCAC TGCTCACCGC GTCGTTGCTC
GCATTGTCGC TGTTCCACCG GGGCGGTGAG GTGGTGGACG GGGCGACGGT GGCCGCGGAC
CGGGACGCGC TGGTGCGGTG GCCGCCCCAC TATGCGCGGC CGTTGGATCC GCTGCGGTTG
CCGTGTGTAG GGGAGACTCC TCCGGCGGAG GGGGCGCCGA CCGGGTTGGC GTTCACCGAC
CCGGTGCTCG GCGACTACCT GGTGGCGCGG CTCGTCGCTG AAGAGCTGGC GGAGCTGGCT
GAGGCGCGGA TGCGGGAGTT GCGGTCGATC CGTCCCGCGC CGGTGGACGA CTCGTTCCTG
TACGCCCTGC TGTCATTTAC GCCGCTGTCC GTGTCCGGGG AGGTGCTCCG GTTCCTTGCG
GACCGGTTGC GGTTGCTGGC CCCGCATGTC CGTGACGAGC TGCGGCTGGT CTTGGCTGAG
CTGTTGCGGG AGGCGGGACG GCACCGGCGG GAGGCGCACT ACGCCGGCTA CCGTCCTGTT
GAGTTGGGGG CGGCATGCCG GGACGCGATC TACACCGCGA ACCTGCTGCT GGTGCTCATG
GGGGTGCACG GCGGGGCGGT GCCGCTGCGG GAGCTGTTCG GGGCGGGCGC GGTGCGGCGG
TGGCGGTCGC TGGCGCACCT GTGGCGGTCC CAGTTGCCGC CGGAGCAGTG GGCCAGTCTG
GCGGAGTCGC TGCGCGTGCA CGAGGACAGC CGTGGCGGGC TGGTCGTCTA CCCCTGTGAA
GGGCTGCCGC TTGACCCGGA TCCGGGGGCG CAGACCTATC TGGGTGAGGT GGCGCGGGAT
GCGGCGCTGC TGGCGGACAG CGGCACCCAG CAGTTGCTGC ACGCCTTGTC CCCGCTGATC
CGTTTGTTCG GCGGGGATGT GACGGCCCGT GCTGCCGGGG AGGTGTCGGA CGCGTACGCG
GTGCTGGCGT TGGCGTTCAC CGCGGCGGAG ACGTCGGACG AGGACTTGGT GTCCTACTAC
GATCGGGCGT TCTCTTTGGC GGCCATGCTG GATTCTGATA ACCGGCTGCG GTTCATCGTG
TTCCTGCTAC GGCAGTTGCG GGGGCACACC CACCGGTTGG GAGCGCGTCT GGTGCCGCTC
GTGGCCCGGT ATGTACGCCC GGTGGGGGTG GCACGGAGTG CGCGGGCGTC GGTGCGCCGG
TTGGCGGAGG AGCACAACGA GCATGTGACG GCGATCCGTG ACGTGCTGGC GGGCCGCTGG
TGA
|
|---|
| Protein sequence | MPGLGSLLPA AVLRCRALWR TSVVALREPV RYCDAIRLLG ADDPDVVELI DQLVADEATD
LLAARTELVG FTHQALNRLD REAHLLTRVE RTRYIAAAHS AIVVTAFFES LDDTELPFRL
DNGLDDAAAG VADRKRLGEF VALLVASAPP LPRPQRSTAD GRARVRRFYL RRCKQLPSVL
RGMPLWEELD ESQRRAITER LGASLADRCV RRYEELRDKL AASFPEFGAW ASLSMVRART
SVTDVPMGLS RLQHRLQSIS TGRVPSAVRG ALARAHEERL NVPPVRHTGG THIPPLSISY
INPCFRVTEI TAHARPHDAA WWEEHTEVRD DLAEFLLGYV TSPRALTHPL IVVGPPGSGK
SALASVLAAR LPDSDFTAVR VSGRNLPADG YDRVLADRFA EALAAAGGGN CDALPVLILD
GLEEVTTRSL ASRSDLLAGV TRFQRERAAG PDPVAVVVTC RDSTAARMRF PLGSVVLRLE
DFTDAQLATW LSIWNRVNSS YFHHHGVASL DWETVEAHFP LARRPLFLLM LALYDGVGNA
LRRVNAPLRE TALYERWLRM LADSTDRADP VATERPAEAE SDPEVRSGRI EQALLTASLL
ALSLFHRGGE VVDGATVAAD RDALVRWPPH YARPLDPLRL PCVGETPPAE GAPTGLAFTD
PVLGDYLVAR LVAEELAELA EARMRELRSI RPAPVDDSFL YALLSFTPLS VSGEVLRFLA
DRLRLLAPHV RDELRLVLAE LLREAGRHRR EAHYAGYRPV ELGAACRDAI YTANLLLVLM
GVHGGAVPLR ELFGAGAVRR WRSLAHLWRS QLPPEQWASL AESLRVHEDS RGGLVVYPCE
GLPLDPDPGA QTYLGEVARD AALLADSGTQ QLLHALSPLI RLFGGDVTAR AAGEVSDAYA
VLALAFTAAE TSDEDLVSYY DRAFSLAAML DSDNRLRFIV FLLRQLRGHT HRLGARLVPL
VARYVRPVGV ARSARASVRR LAEEHNEHVT AIRDVLAGRW
|
|---|
| |