Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1336 |
Symbol | |
ID | 3579308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1546710 |
End bp | 1547480 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637685033 |
Product | Sir2 family regulator |
Protein accession | YP_289397 |
Protein GI | 72161740 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.690541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTGCCA CCGTGAACAT CAGCGACGTC GGACAATGGT TCGCCGAAAG CGAGCGGACG ACGGTGCTCA CCGGGGCCGG GATCTCCACT GCCTCAGGCA TCCCCGACTT CCGGGGACCT CAAGGCCTGT GGACCCGCAA CCCGGGGGCC GCCGCCATGT TCGACATCGA CATCTACCGC TCCGACGTCA ACGTGCGGCG CGAAGTATGG CGGATGCGCC GCGACAGTCC CGCACTCACC GCGGAACCCA ACGACGCCCA CCGGGCCCTC GTCGACCTGG ACCGGACCGG GCGGCTGCTC GCCGTCATCA CCCAGAACAT CGACGGCCTG CACCAGAAAG CCGGGCTAGC CCCCGAACGC GTCCTCGAAG TGCATGGCAC CATCCACGAA GTGGAATGCC TGTCGTGCGG CCGGCGCGTC CCCACCCCCG ACGTGCTCGC CCGCCTCGAC GAAGAATCCG ACCCCCGCTG CCTCGCCTGC GGCGGCATCC AGAAAGCCGC CACGATCTCC TTCGGGCAGC GTCTCGACCC GGACGTGTTG GACGCCGCCA TCACCGCTGC TAAAGACTGC GACCTGTTCC TCACCGTCGG CACCTCGCTC ACCGTCCACC CGGTGGCGGG CCTGTGCGAC ATCGCCCGCG AACACGGCGC CCGACTCGTG ATCATCAACG CCGAACCCAC CCCCTACGAC GAGGTGGCCG ACGCTGTCCT CCGCGACCCC GTGGAAACCG TCCTCCCGGA GCTCGTCCAG CGAGCAGTAT CCACCGCCTG A
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Protein sequence | MAATVNISDV GQWFAESERT TVLTGAGIST ASGIPDFRGP QGLWTRNPGA AAMFDIDIYR SDVNVRREVW RMRRDSPALT AEPNDAHRAL VDLDRTGRLL AVITQNIDGL HQKAGLAPER VLEVHGTIHE VECLSCGRRV PTPDVLARLD EESDPRCLAC GGIQKAATIS FGQRLDPDVL DAAITAAKDC DLFLTVGTSL TVHPVAGLCD IAREHGARLV IINAEPTPYD EVADAVLRDP VETVLPELVQ RAVSTA
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