| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1334 |
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| Symbol | |
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| ID | 3579306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1544432 |
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| End bp | 1545358 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637685031 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_289395 |
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| Protein GI | 72161738 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCCTCATC GGGAGGACAG CGGCACCGGC CCTCTCACCG GGGCCGCCGT CGGAGCGGTC
CTGCTGAACC AAGCCCGCGA TGAGGAGGTC GACATGACCA CCAACAGCAC AACGGCACGC
CGCCGTAGCC CCGCCCACCG GCGCGGTGGG GTGGTTCGAC CCCCTGCGCC CCAGTCCCGC
CCCACTGGAC AGGCGGAGCG GCTGTTGGCC GCACTGGCCG ACCATCAGGA CGATGAGGAG
ACCAGTGCGC GGATCCGTGA CGAACTGGTA CGGCTGTACA TGCCGCTCGT CCGCCGTGAG
GCGCGCCGCT ACCGCAACCG TGGCGAACCC ATGGACGACC TCTACCAGGT CGGCATGCTC
GGCCTGATGA AAGCCATCAA GGGCTTCGAC CCGTCCTATG GCAAACCGTT TGTCGCCTAC
CTGCTGCCCA TGGTCACCGG CGAGTTGAAA CGGCACTTCC GGGACACGAC GTGGGCGGTG
CGCGTGCCGC GCGTACACCA GGAGCGGCGC AGCGAACTCA ACCGGGTGAT CGCCGAGTTC
ACCCAGAAAC ACGGACGCAC TCCCACCACC CGGGAGATCG CGGACGCTTT GGAAATGGAC
CTCGAGTCCG CGATCGAACT GATCGACGCG TCCTCGGCCT ACAGTGCGCT CTCCTTGGAT
ACGCCGTTCG GTGACACCGA GGACGAGTCC GCGCTCGGCG ACACGCTGGG GGTGGCCGAC
GGCGACTTGG AGACCGTGGT CGACAAGACG TCGCTGAAAG ACGCGTTGGA CCGACTGCCG
GAGCGGGAAC GCCGCGTGAT CCTGCTGCGG TTCTTCGGCA ATAAGACACA GAGCGAGATC
GCTGCTGACG TGGGCCTGTC CCAGATGCAC GTGTCCCGCC TGCTGTCGCA GACCCTGCGG
CAGCTGCGCC GCGAGCTCCT CTCCTAA
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| Protein sequence | MPHREDSGTG PLTGAAVGAV LLNQARDEEV DMTTNSTTAR RRSPAHRRGG VVRPPAPQSR
PTGQAERLLA ALADHQDDEE TSARIRDELV RLYMPLVRRE ARRYRNRGEP MDDLYQVGML
GLMKAIKGFD PSYGKPFVAY LLPMVTGELK RHFRDTTWAV RVPRVHQERR SELNRVIAEF
TQKHGRTPTT REIADALEMD LESAIELIDA SSAYSALSLD TPFGDTEDES ALGDTLGVAD
GDLETVVDKT SLKDALDRLP ERERRVILLR FFGNKTQSEI AADVGLSQMH VSRLLSQTLR
QLRRELLS
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