| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1304 |
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| Symbol | |
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| ID | 3580303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1514304 |
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| End bp | 1515557 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637685001 |
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| Product | nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein |
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| Protein accession | YP_289365 |
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| Protein GI | 72161708 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.165264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCGGGC GTCCCACAAA GATCCCATCT CTTGACATTG GTTATAACTA TCTGAATCAT
GATCTTGTAC CCGTGTGGCG TATTTCACTT ACTGATGGAT CAGTAAGGAA GGGTGTGCCG
TACCCCCGAG AACCTGTCCT GCCGGCACCG CACCGACAGG ACAGAATCCC CCAACTAGTG
AGGACAGCAA TCATGGGTAG TGCCCGCAGG AGTGGAGCGT TCCGCGCTTT GGCTCTCGCT
GCAGCCCTGA CGTTCACTCT CAGCGCGTGC GGCCCGTCGG AGTCAGACGG CCCCGCACAG
AACGAGGACG GACTCACCAC GGTGCGGGTG GGCCTGGCCG AGCCCACGTT CAACACCGCC
CTCATCAACC TCGTGATCGA CGAGGACATC GACGCCAACC ACGGCCTTGA CATGCAGCCC
ACGAGAAGCG GCGCAGGAAG CACCAACCAG ATCGCGGCCC TGCGCGCCGG GGAATACGAC
TTCGCCGGAG TGGGCACCGC CACCGCCGCG GACGCCGTCG CCGAAGGCGC CGGACTGGTC
ATCGTCGCCG GAACCGGCGG ACTCATCAAC AACATCGTCC TCAACGCCGA CGTCGCCAAA
GGACTCGACG TCGCCCCCGA CGACCCGGTA GAGGAGCGGA TCAAGGCCTT GCGCGGCCTG
ACGATCGCCA CCAGCCCACC AGGGTCCTCC AGCAACCTCA CCCTGCGCCA CCTGGTGCAG
CAGCACGGCC TCGACCCGGA CAAGGACCTC AACATCGTCC CGGTCACCGA CACCTCTTCC
ATCGTCGCTG GCATCCGCCA AGGCAAGTTC GACGGCAGCT TCTTCGGTGT CGGTGTCGCC
GACGCCAACA TCGCCGACGG CTCCGGAACC CTGTGGATCT CCCTGCCGCG CGGCGACATC
GAAGAGTTCA ACGAGCTGAT CGGCGTCTGC ATCGTCAGCA CGAGAGAGTT CGTGGACAAC
AACCCCGAAA TCGTCGAAGC TTTCCACGCT GCCCTCGCCG AAGCCCAAGA GTTCGTCGCC
TCCGACCCGG AAGCGGCCGG AAAGGCGCTC CACGAGAACT CTTTTGCGAA CCTCGACGCC
GACGTCTTCG CCACCGCCTG GGAGCAGGCG CAGACCGGCT ACCCCGAAGG CGTGCTGTTC
ACCCGCGAGA ACTGGGAGAC CTACCTCGAA CTCTTCGGGG ACGCCTCCGA CAAGGACCTG
GAGAGCATCG TGTACGAGGA CTTCGTCGCC GAACCCGCCC GTGGTGAGTC CTAA
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| Protein sequence | MCGRPTKIPS LDIGYNYLNH DLVPVWRISL TDGSVRKGVP YPREPVLPAP HRQDRIPQLV
RTAIMGSARR SGAFRALALA AALTFTLSAC GPSESDGPAQ NEDGLTTVRV GLAEPTFNTA
LINLVIDEDI DANHGLDMQP TRSGAGSTNQ IAALRAGEYD FAGVGTATAA DAVAEGAGLV
IVAGTGGLIN NIVLNADVAK GLDVAPDDPV EERIKALRGL TIATSPPGSS SNLTLRHLVQ
QHGLDPDKDL NIVPVTDTSS IVAGIRQGKF DGSFFGVGVA DANIADGSGT LWISLPRGDI
EEFNELIGVC IVSTREFVDN NPEIVEAFHA ALAEAQEFVA SDPEAAGKAL HENSFANLDA
DVFATAWEQA QTGYPEGVLF TRENWETYLE LFGDASDKDL ESIVYEDFVA EPARGES
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