| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1279 |
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| Symbol | |
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| ID | 3581078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1485202 |
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| End bp | 1485960 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637684976 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_289340 |
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| Protein GI | 72161683 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.106585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACGTCA ACGGAGCTTC CGTCGTCGTG ACCGGAGGGG CTTCCGGGCT GGGAGCCGCG
ACCGCGGCAC GGCTGGCGAA GCAGGGAGCC CACGTGGTCA TCATCGACCT GCCGCAGTCC
AAGGGCGCGG AGGTCGCCAA GGAGATCGGC GGGCAGTTCG GCCCCGCGGA CGTGACCGAC
ACCGACGCGG TCAACGCCGC GCTCGACCTC GCCGAAGCCA AGGCCCCGCT GCGCGCCCTG
GTGCACTGCG CGGGACGCGG CGCCACCGTG CGCGTGGTGG AGAAGGACGG CAGCCCCGGG
TCTATGGAGA CCTATGAGGA GATCGTCCGG GTCAACCTCT TCGGCACGTT CAACATGCTG
CGTCTGGCCG CCGCCCGGAT GGCGAAGAAC GACGTCGTCG ACGAGGAGCG CGGCGTGTGC
GTGCTGACCG CCTCGGTCGC CGCCTACGAG GGGCAGATCG GGCAGATCCC CTACGCCTCG
GCCAAGGCCG GTGTGGTGGG TATGACCCTC GTGGCCGCCC GCGACCTGGC GTCGAAGAAG
ATCCGGGTCG CCACCATCGC CCCCGGGGTG TTCGACACGC CGATCCTCAG CCGCTTCCCG
CAGGAGCTCC GCGACGCCCT CGGCAAGTCG GTGCCGCACC CCAACCGGCT GGGCCACGTC
GACGAGTACG CCATGCTCGC CCACCACATC ATCGAGAACA AGATGATCAA CGGCGAGGTG
ATCCGCCTCG ACGGTGCCCT GCGCATGAGC GCGCGCTAA
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| Protein sequence | MDVNGASVVV TGGASGLGAA TAARLAKQGA HVVIIDLPQS KGAEVAKEIG GQFGPADVTD
TDAVNAALDL AEAKAPLRAL VHCAGRGATV RVVEKDGSPG SMETYEEIVR VNLFGTFNML
RLAAARMAKN DVVDEERGVC VLTASVAAYE GQIGQIPYAS AKAGVVGMTL VAARDLASKK
IRVATIAPGV FDTPILSRFP QELRDALGKS VPHPNRLGHV DEYAMLAHHI IENKMINGEV
IRLDGALRMS AR
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